Matches in Nanopublications for { ?s ?p ?o <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion>. }
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- kinetics-model type Thing assertion.
- method type data_0957 assertion.
- method type Thing assertion.
- mock-coloc-experiment type Thing assertion.
- RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU type AIDA-Sentence assertion.
- kinetics-model comment "P0 represents protected RNA pool proportion; k'i represents digestion rate constant" assertion.
- method comment "Leverages classical enzymatic kinetics to track depletion dynamics of transcripts using RNase gradients" assertion.
- mock-coloc-experiment comment "Distinguishes genuine protection from intrinsic RNase resistance" assertion.
- RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU seeAlso operation_3680 assertion.
- method description "Controlled Level of Contamination coupled to deep sequencing - a novel subcellular transcriptomics approach" assertion.
- mock-coloc-experiment description "Control experiment with detergent-permeabilized membranes to detect false positives" assertion.
- method has_function operation_3680 assertion.
- RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU text "CoLoC-seq is a novel subcellular transcriptomics approach that uses enzymatic kinetics to distinguish genuine organellar resident RNAs from surface-attached contaminants." assertion.
- method SIO_000135 kinetics-model assertion.
- method SIO_000135 mock-coloc-experiment assertion.
- kinetics-model SIO_000211 "P0" assertion.
- kinetics-model SIO_000211 "k'i" assertion.
- method applicationArea "Extracellular vesicle characterization" assertion.
- method applicationArea "Mitochondrial transcriptomics" assertion.
- method applicationArea "Organelle RNA localisation" assertion.
- kinetics-model formula "f(A) = (1 - P0) * exp(-k'i * A) + P0" assertion.
- RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU about gkac1205 assertion.
- kinetics-model name "CoLoC-seq Kinetics Model" assertion.
- method name "CoLoC-seq" assertion.
- mock-coloc-experiment name "Mock CoLoC-seq" assertion.