Matches in Nanopublications for { ?s <http://www.w3.org/2000/01/rdf-schema#comment> ?o ?g. }
- assertion comment " Our new preprint with @philipncohen -- "The State of Sociology: Evidence from Dissertation Abstracts" https://osf.io/preprints/socarxiv/a8uyp?utm_source=dlvr.it&utm_medium=twitter . Philip summarizes here : https://mastodon.social/@philipncohen/112962549677291692?utm_source=dlvr.it&utm_medium=twitter " assertion.
- assertion comment " Many thanks the ACM publishing folks and tech policy committee for supporting our new policy brief: https://twitter.com/acmpolicy/status/1814271955077333165 " assertion.
- assertion comment " Useful: "Statistical Challenges in Online Controlled Experiments: A Review of A/B Testing Methodology" https://www.tandfonline.com/doi/full/10.1080/00031305.2023.2257237 Not just for "online". Great summary of methods that can be used to reliably inform business/organizational practice. " assertion.
- assertion comment " Peeling back the layers of our #energyblindness. We love to talk about productivity gains of automation, but we rarely talk about the energy efficiency loses of replacing human labour. More about replacing human labour with fossil energy and implications: https://read.realityblind.world/view/975731937/192/#zoom=true https://twitter.com/wesleyfinck/status/1806061359773200699/photo/1 https://x.com/wesleyfinck/status/1657956908571979776 " assertion.
- assertion comment " We've been hard at work trying to revitalize social media for scientists. Let us know if you are interested and what kind of features you want + share with your network, thx! https://twitter.com/rtk254/status/1803100275990794566 " assertion.
- assertion comment " Active inference models of science 👀 https://arxiv.org/abs/2409.00102 @InferenceActive " assertion.
- assertion comment " https://x.com/_angie_chen/status/1796220428345573399 https://x.com/LChoshen/status/1816819564002304091 " assertion.
- assertion comment " TIL - "Sympoiesis" Like autopoiesis, but symbiotic organizing instead of self-organizing https://twitter.com/rtk254/status/1831874637552312530/photo/1 Source: https://www.dukeupress.edu/staying-with-the-trouble " assertion.
- assertion comment " I'm quite interested in knowledge graphs x LLMs but these guys are miles ahead thinking about moral graphs x LLMs. Super interesting work on aligning AI https://www.meaningalignment.org/research/new-paper-what-are-human-values-and-how-do-we-align-ai-to-them " assertion.
- assertion comment " Excellent critical review. This in particular tracks. I took a course with him, and while I don't remember anything from the course, I do remember being struck by his brazenness to ignore entire academic disciplines that were inconvenient for the stories he was trying to sell. https://twitter.com/rtk254/status/1832576205955923984/photo/1 https://twitter.com/daniel_dsj2110/status/1832026107945570404 " assertion.
- assertion comment "The content of this nanopublication looks good from a formal point of view and seems to match the description in the manuscript (under review). The ZoobBank URI (https://zoobank.org/NomenclaturalActs/7ad8f87f-e7c1-4094-bd63-7662f167e9cb) doesn't resolve, which I suppose is because this entry hasn't been approved/published yet. So, this is likely not an issue (but I cannot check)." assertion.
- assertion comment "The taxon name should be refered to by its ZooBank URL (https://zoobank.org/NomenclaturalActs/7ad8f87f-e7c1-4094-bd63-7662f167e9cb) as in the other nanopublication (this one: https://w3id.org/np/RANfU_7tS66XyfZS4RauqKLLnSEcfa1L06ueqKGLMU9TA), and not as a locally minted identifier. Otherwise, this nanopublications looks good on the formal side, and seems to match the content of the manuscript (under review) as much as I can tell as a non-expert of the field." assertion.
- assertion comment "It seem that the statement that is meant here is to link the *taxon* to the given habitat, and not a specific *organism* of that taxon. In that case the other template "Association between taxa and environments" should be used. But maybe I am wrong and the authors really want to talk about a specific organism of that taxon they found in the given habitat. In this case, the nanopublications is alright. The rest looks good." assertion.
- assertion comment " HELM evaluation (@StanfordHAI @stanfordnlp @percyliang ) Announces the integration of Unitxt For more datasets, easier integration of new datasets sharable and reproducible pipelines and more Kudo @ElronBandel & @YifanMai https://twitter.com/LChoshen/status/1833134684752204287/photo/1 The blogpost: https://crfm.stanford.edu/2024/09/05/unitxt.html More on Unitxt https://github.com/IBM/unitxt More on HELM https://crfm.stanford.edu/helm/ " assertion.
- assertion comment " One thing I didn't really think about before this, when I talk to a model and it generates an image, the image is mine. Why isn't it the case when it is text? Well, isn't it? t\h @RamonAstudill12 @YangsiboHuang others https://twitter.com/LChoshen/status/1831708316982231235 " assertion.
- assertion comment " Very important work! And very brave testimonies. It really shows the difference between wisdom and intelligence, individual and collective. And how society can self destruct, anything but to accept reality.. https://adultsintheroom.libolibo.me/ " assertion.
- assertion comment " 💡This sparks thoughts for another application of LLMs in science. Recover the experimental materials from a description of them in the paper by asking an LLM to code the software program. Would be particularly useful in psychology. #metascience #research https://twitter.com/emollick/status/1805342038612918335 " assertion.
- assertion comment " Study/exp design tools are on my mind. They seem valuable for preventing errors, but their scope seems narrow. 🤔What if... Planning tools recommended software, hardware, project management? We extended them to planning qual and multi/mixed methods studies? Pic: @NC3RS EDA https://twitter.com/metasdl/status/1800680071067574623/photo/1 " assertion.
- assertion comment " I have a challenge for you #metascience and #openscience : Where can I go online to find examples of great papers (clear, rigorous, theorized soundly, etc.)? I'm looking for the opposite of RetractionWatch. " assertion.
- assertion comment " Sharing a blog post, I wrote about where AI tech should allocate funds if they are earnest about "aligning AI tech with Humanity" and my attempted experience applying to one of their grants. #OpenAI #DataCommons #Governance https://medium.com/@shahar.r.oriel/pathways-to-ai-governance-an-alternative-grant-and-proposal-a2768e75d13 " assertion.
- assertion comment " AGI is right around the corner 🙃 https://twitter.com/rtk254/status/1833917330189156749/photo/1 https://drops.dagstuhl.de/entities/document/10.4230/LIPIcs.COSIT.2024.28 " assertion.
- assertion comment " You only learn a few parameters, with your parameter "efficient" finetuning. The rest is💩 A whole line of works🧵 shows that by throwing redundancy we can get better LoRas, keep less memory and of course model merge https://twitter.com/LChoshen/status/1833879920348422216/photo/1 ComPeft shows you can improve LoRAs by pruning aggressively and making the remaining weights binary (+/-) It also means parameter efficiency still relies on overparametrization(but only during training) https://x.com/prateeky2806/status/1727589818618523783 Laser shows it on full models https://x.com/pratyusha_PS/status/1739025292805468212 https://twitter.com/LChoshen/status/1833879922500080084/photo/1 In merging, many find that with only those few weights one can make a "multitask" model, keeping the important ones for each model and switching. those e.g. 1% of the weights also represent tasks well Many.. https://www.alphaxiv.org/abs/2408.13656 https://www.alphaxiv.org/pdf/2405.07813 https://www.alphaxiv.org/pdf/2310.01886 Those works are focused on efficient multitask learning that compresses the models, can keep many models and switch between them as necessary. Another option to compress is to SVD the LORA, separately or to a shared space, saving the tiny differences https://x.com/RickardGabriels/status/1810368375455207470 And just because we discussed compression, of course this is all just "model compression" if you want to compress to just save space, there are smarter ways: https://github.com/zipnn/zipnn " assertion.
- assertion comment " AI alignment debates would make a lot more sense if they were debates about aligning corporations https://twitter.com/rtk254/status/1832769861728030803 " assertion.
- assertion comment " Striking that this proposal is converging to the hybrid architecture of the only instance of a generally intelligent system we have so far (biological brains): System 1 + System 2 (broadly construed). https://twitter.com/kasratweets/status/1806486047750009336 Makes sense if we're trying to build new instances of intelligence that are adaptive in a similar fitness landscape. Wonder what we'd converge to in other environments? " assertion.
- assertion comment " Not every day you get to help science... Know (or released) such a dataset? (BTW not my research I am helping them as well) https://twitter.com/NitCal/status/1833917233564880969 Possibly interested people @yufanghou @AndreasWaldis @neuranna " assertion.
- assertion comment " One thing I've learnt from @RamonAstudill12 model releases RLHF multiple times! We can't even train once on open data... https://twitter.com/LChoshen/status/1831708316982231235 " assertion.
- assertion comment " @Julius_Steuer @mariusmosbach @dklakow Response: The long term attention makes that https://x.com/devarda_a/status/1824065227916230848?t=JI_rNp3_ZXRLFFu0WJ5R2g&s=19 " assertion.
- assertion comment " Is there a good platform to engage in discussion about a paper in a group? I had in mind something like PDF annotations,but that you can read the PDF without logging and there are threads of discussions like Google Docs, but other formats are welcome == alternative to arXiv links @rtk254 sounds like you might know " assertion.
- assertion comment " I just had the most marvelous chat with @CohereForAI-R, Claude and Latex (next tweet) I asked +R to explain a latex error, and it failed. NP, happens Claude gave a partial direction, sending me back to latex In latex I found the error, but was too lazy to solve so ... 1/2 https://twitter.com/LChoshen/status/1817455710365495492/photo/1 I gave Claude the additional feedback and it Solved it! Then came the surprising moment In parallel, I also told R about my discussions with Claude, and it recognized the feedback perfectly! If only I could improve models that way... (data is collected by https://sharelm.github.io/) https://twitter.com/LChoshen/status/1817455713054077372/photo/1 So maybe natural feedback extraction would be able to use it one day? https://x.com/LChoshen/status/1813662203532263467 P.S. Think if we didn't only save chats and feedback and extracted, but UIs would have asked: I noticed you had a problem, was it solved eventually? How? Like stack overflow for our own (open, mind you) specialized models. I'd be happy to teach them if it was used to help others " assertion.
- assertion comment " #ICML2024 Weight decay regularizes weights to be low-rank + increases alignment between laters Good labels end with low rank middle layer weights This doesn't happen with random labels https://openreview.net/forum?id=u3sssLLu4y&referrer=%5Bthe%20profile%20of%20Samuel%20Wheeler%5D(%2Fprofile%3Fid%3D~Samuel_Wheeler1) @kkpatelnmh @PedroSavarese @iammattwalters https://twitter.com/LChoshen/status/1816819564002304091/photo/1 " assertion.
- assertion comment " #700 after lunch https://twitter.com/LChoshen/status/1815631742323093885 " assertion.
- assertion comment " #2616 after lunch https://twitter.com/LChoshen/status/1815631744407654878 " assertion.
- assertion comment " Postdoc on the mathy side of LLM (mech.) interpretability and model understanding to join us? https://twitter.com/JustinMSolomon/status/1814793639945494800 People that may know people @amuuueller @megamor2 @lena_voita @boknilev @nsaphra " assertion.
- assertion comment " #icml2024 paper: how are LLMs used in reviews? 10% of ICLR sentences are auto-generated. More LLM usage when submitting later Less when referring to at least one other paper https://arxiv.org/abs/2403.07183 @Stanford and @nec Many authors: https://twitter.com/LChoshen/status/1816041318344249749/photo/1 As Stanford likes, authors take a full tweet :-) @liang_weixin @yaohuiz3 @hay_lepp @CaoHancheng @xuandongzhao @ChenLingjiao @haotian_yeee @ShengLiu_ @EyubogluSabri " assertion.
- assertion comment " best #icmi2024 position: 103 datasets that claim to be more diverse, are not. Diversity claims are subjective, political and not tested, instead of claiming, let's measure. But how? @dorazhao9 @SciOrestis @alicexiang https://arxiv.org/abs/2407.08188 https://twitter.com/LChoshen/status/1816031646568583532/photo/1 Basically, like we evaluate everything else. Measure one thing at a time (don't also test a new model) Have a specific claim (is it language diverse, background,origin) and quantify it Separate it from other constructs like how much data was collected or whether it is biased https://twitter.com/LChoshen/status/1816031649416556577/photo/1 " assertion.
- assertion comment " Do I need to introduce you to KTO? One view of it is that you don't need pairs for RLHF #icml2024 https://twitter.com/winniethexu/status/1815297532953555031 " assertion.
- assertion comment " .@soumithchintala in his opening remarks: Close modelling vs opening is just your assumption on how far is AGI We should care more how others see us and we should fill the gaps in open models ecosystem. Mainly open human feedback For which he states a main missing component We need a "sink" to pool all the feedback into one place without it costing anything to contribute. I agreed, until we created https://huggingface.co/datasets/shachardon/ShareLM Use it improve it or base on it,🤗 takes no money for hosting He adds another problem,coordinating, UI, feedback, sink hosting, No worries we are on it, if you are interested in building such a thing or have thoughts comment or DM If you are too lazy, maybe just share the feedback you already give for the open? https://sharelm.github.io/ Btw no complaints for soumith of course, he's great and until someone tries. You need to be relevant to be even eligible for disagreement (as cancel culture and extremism sadly teach us) " assertion.
- assertion comment " Feedback is so natural, we already give it during a ⅓ of the chats, and now we can use it (170K human feedback ) https://twitter.com/Shachar_Don/status/1813578072593150137 " assertion.
- assertion comment " Reading papers before they are trendy, Sharing knowledge even if not a self advertisement (Sharing a work I was excited about😳) Let's all be Kawin https://twitter.com/ethayarajh/status/1813292645340573839 " assertion.
- assertion comment " Thoughts in psycholinguistics after the BabyLM challenge https://twitter.com/weGotlieb/status/1813506588155723807 " assertion.
- assertion comment " Stealthily and steadily Unitxt grows https://twitter.com/seirasto/status/1813265905109070074 " assertion.
- assertion comment " A thread of unusual NLP for social good (IMO, add your own) To help agriculture where technology and information reaches less. Yes robots are cool, but 783M people in the world experience hunger google says https://x.com/LChoshen/status/1810675837332869409 A Chatbot for Asylum-Seeking Migrants in Europe to "help migrants identify the highest level of protection they can apply for" https://arxiv.org/pdf/2407.09197 " assertion.
- assertion comment " "Vision LMs fail on 7 absurdly easy visual tasks identifying whether two circles overlap; two lines intersect; which letter is being circled in a word; counting the circles in an Olympic-like logo..." Do I need to explain any further? @Pooyanrg @anh_ng8 https://arxiv.org/abs/2407.06581 " assertion.
- assertion comment " AC POV Filling holes ⚠️emergency reviews⚠️ are so stressful Reviewer accidents are rarely last minute, but they understandably don't run to update me, right? AC has no way of knowing, except if missing a sign of life during the review period *ACL checklist is that, so helpful! So, yes, those checklists are beuorocratic timewaste (PCs supposedly desk reject given those? How often?) But, for ACs this (or any check this box if everything is fine) is the best thing that could happen. What do other conferences have? What are your thoughts? " assertion.
- assertion comment " Pretraining data mixture is the secret sauce, so tells us the open not-open llama models. This beats DoReMi x10 Research pretraining, its impactful and rare https://twitter.com/sivil_taram/status/1810697629074067640 " assertion.
- assertion comment " A great place for #benderRule ... And this is all in English: https://twitter.com/FeiziSoheil/status/1810706469626535975 https://x.com/MLMazda/status/1808508877983617181?t=XRLNjnXTvUp1IuvHIF3AUA&s=19 " assertion.
- assertion comment " I often wonder if what I do helps the world, enough? I remember @harari_yuval & @dataspade describing agriculture as a crucial field for social good. This group bridges agricultural information gaps, with NLP! https://arxiv.org/abs/2407.04721 @pratinavseth @adi_kasliwal @labnol https://twitter.com/LChoshen/status/1810675837332869409/photo/1 " assertion.
- assertion comment " LoRAs have a lot in similar. So one can compress (+-SVD with unique s) them together, serve efficiently or understand their shared spaces https://twitter.com/RickardGabriels/status/1810368300045709398 " assertion.
- assertion comment " Want to study different LoRAs? Merging? Task dependence? https://twitter.com/RickardGabriels/status/1810368226154684598 " assertion.
- assertion comment " How do datasets size affect model weights? Mainly norm growth but also eigen values Important resource: 2k image loras (for text loras there's https://huggingface.co/Lots-of-LoRAs ) https://twitter.com/MohammadSalaama/status/1806619254659182894 " assertion.
- assertion comment " To reduce evaluation contamination @XuanmingZhang07 @Zhou_Yu_AI @columbianlp et al. convert dataset examples into templates(Fig.) https://arxiv.org/abs/2406.17681 EWOK datasets are built to have this trait https://x.com/neuranna/status/1791465842632454184 Interesting trend will it last? solve contamination? https://twitter.com/LChoshen/status/1806396147281637645/photo/1 @XuanmingZhang07 @Zhou_Yu_AI @columbianlp If you ask me, a nice step, but it only solves the worst contamination (clear training on the test set). Not on just training on similar formats, synthetic data etc. to improve. So it is a good approach that should last, but we need more. (@deliprao you had similar claim right?) " assertion.
- assertion comment " LLM representations align with brain FMRIs, but not always to the same extent. When do they match: https://twitter.com/bkhmsi/status/1805595993284415913 " assertion.
- assertion comment " Makes one thinks https://twitter.com/OwainEvans_UK/status/1804182787492319437 " assertion.
- assertion comment " Evolver, model merging in a genetic algorithm Improves on current merging techniques (my beloved TIES 🫣 ) Train diverse models Merge regularly or take diff between two models Update some parameters Keep if good Repeat https://arxiv.org/abs/2406.12208 @jingli9111 @banting_liu @576gsk https://twitter.com/LChoshen/status/1803410440535326786/photo/1 Merging is aimed at taking many models and getting one that generalizes better, there are various methods for it, read more e.g. on TIES https://x.com/prateeky2806/status/1665759148380758022 Genetic algorithms evolve models, in steps: Create mutations (here new m = m_old + a(m_1-m_2)) m are models a some constant Crossover, take some of the mutation and apply it, for each parameter randomly keep m_old or update to m_new Survive, keep only the best performing on val By sometimes merging and sometimes evolving (and dev sets) they improve over all current methods https://twitter.com/LChoshen/status/1803410445635653960/photo/1 In some sense, this can be seen as a better search in the region between the merged models, which we know is not equally good but all better than the edges https://x.com/LChoshen/status/1729488495515713672 https://twitter.com/LChoshen/status/1803410447246250483/photo/1 " assertion.
- assertion comment " ABOLISH THE VALUE FUNCTION https://twitter.com/micahgallen/status/1832019686101291361 " assertion.
- assertion comment " Sincerely expecting to either read or derive myself over the next several years that fold-change detection with a normalizing feedback input amounts to prediction-error (grad-of-log-prob) signaling. https://twitter.com/drmichaellevin/status/1832449357095829681 "Grad of log of SOMETHING" has already been shown in previous work, hence my expectation that it's not gonna take long to show how normalization can get done. " assertion.
- assertion comment " 👀👀👀👀👀👀👀👀👀 https://twitter.com/du_yilun/status/1757072068133220728 " assertion.
- assertion comment " So is this actually experimental evidence that inter-areal communication uses an unweighted, linear read-out of the spike trains on the incoming synapses? https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1007692 https://twitter.com/ShahabBakht/status/1827165318885572819 " assertion.
- assertion comment " TL;DR: https://twitter.com/EliSennesh/status/1823552658319552917/photo/1 https://twitter.com/EliSennesh/status/1823164927248318565 " assertion.
- assertion comment " Are there any brave souls that have tried to make Supersize Me but for AI automation? (same idea, but eating epistemic junk food instead of real junk food) https://twitter.com/rtk254/status/1835305989387563303/photo/1 For more on the relations between junk food and epistemic junk food https://x.com/rtk254/status/1667868407486619652 " assertion.
- assertion comment " Happening now, if you are spontaneous (dozens from all over the world are already here) exciting https://twitter.com/AITinkerers/status/1834704578643681478 " assertion.
- assertion comment " semantic (structured) social media FTW h/t @ledgerback https://twitter.com/rtk254/status/1836211781615718616/photo/1 source: https://link.springer.com/article/10.1007/s11280-024-01269-0 Our work on this: https://x.com/rtk254/status/1741841659837509995 " assertion.
- assertion comment " 📖 Reading science news articles online is broken. Most sci journalists miss the skeptical takes from PubPeer and academic social media. 💡Someone in #scicomm should program a browser extension that overlays annotations from @PubPeer and other social media on the article page. " assertion.
- assertion comment " This feels like Jung's "Until you make the subconscious conscious, it will direct your life and you will call it fate." but on science. https://twitter.com/rtk254/status/1836209187300253978/photo/1 Source: https://mitpress.mit.edu/9780262553032/the-blind-spot/ (very excited to read!) " assertion.
- assertion comment " Happening now https://twitter.com/DeSciMic/status/1765391765358436666 " assertion.
- assertion comment " Happening now https://twitter.com/DeSciMic/status/1765391765358436666 " assertion.
- assertion comment " Happening now https://twitter.com/DeSciMic/status/1765391765358436666 " assertion.
- NIAID comment "The National Institute of Allergy and Infectious Diseases (NIAID), a component of the NIH, is dedicated to understanding, preventing, and treating infectious and immune-mediated diseases." assertion.
- PMID comment "PubMed ID (PMID) is a globally unique identifier for articles indexed in PubMed, a database of life sciences and biomedical literature maintained by the National Center for Biotechnology Information (NCBI). PMIDs provide a stable reference for citing and retrieving research articles, ensuring access and interoperability with other research systems and tools." assertion.
- PRIDE comment "The PRIDE PRoteomics IDEntifications (PRIDE) Archive database is a centralized, standards compliant, public data repository for mass spectrometry proteomics data, including protein and peptide identifications and the corresponding expression values, post-translational modifications and supporting mass spectra evidence (both as raw data and peak list files). PRIDE is a core member in the ProteomeXchange (PX) consortium, which provides a standardised way for submitting mass spectrometry based proteomics data to public-domain repositories. Datasets are submitted to ProteomeXchange via PRIDE and are handled by expert bio-curators. All PRIDE public datasets can also be searched in ProteomeCentral, the portal for all ProteomeXchange datasets." assertion.
- PRIDEArchive comment "The PRIDE PRoteomics IDEntifications (PRIDE) Archive database is a centralized, standards compliant, public data repository for mass spectrometry proteomics data, including protein and peptide identifications and the corresponding expression values, post-translational modifications and supporting mass spectra evidence (both as raw data and peak list files). PRIDE is a core member in the ProteomeXchange (PX) consortium, which provides a standardised way for submitting mass spectrometry based proteomics data to public-domain repositories. Datasets are submitted to ProteomeXchange via PRIDE and are handled by expert bio-curators. All PRIDE public datasets can also be searched in ProteomeCentral, the portal for all ProteomeXchange datasets." assertion.
- PRIDEArchive comment "The PRIDE PRoteomics IDEntifications (PRIDE) Archive database is a centralized, standards compliant, public data repository for mass spectrometry proteomics data, including protein and peptide identifications and the corresponding expression values, post-translational modifications and supporting mass spectra evidence (both as raw data and peak list files). PRIDE is a core member in the ProteomeXchange (PX) consortium, which provides a standardised way for submitting mass spectrometry based proteomics data to public-domain repositories. Datasets are submitted to ProteomeXchange via PRIDE and are handled by expert bio-curators. All PRIDE public datasets can also be searched in ProteomeCentral, the portal for all ProteomeXchange datasets." assertion.
- ImmPort-Lookup-Vocabulary comment "A Collection of structured vocabularies used to standardize data entries across immunological studies within ImmPort. It is an internal resource designed to standardize data entries within ImmPort. While it references NCI Thesaurus for term descriptions, it is not formally published as a standalone semantic resource. Its primary use is within the ImmPort ecosystem, and external users should be aware of its limitations regarding availability and external interoperability. The ImmPort Controlled Lookup Vocabulary Set includes these vocabularies: Adverse Event Severity: lk_adverse_event_severity; Age at Event: lk_age_event; Amount Unit: lk_amount_unit; Analyte Type: lk_analyte; Ancestral Population: lk_ancestral_population; Study Arm Type: lk_arm_type; Preferred Arm Type Mapping: lk_arm_type_pref_mapping; Cell Population Statistic Unit: lk_cell_pop_statistic_unit; Cell Population: lk_cell_population; Cell Population Definition: lk_cell_population_definition; Preferred Cell Population Mapping: lk_cell_population_pref_map; Compound Role: lk_compound_role; Concentration Unit: lk_concentration_unit; Criterion Category: lk_criterion_category; Disease: lk_disease; Disease Condition: lk_disease_condition; Disease Stage: lk_disease_stage; Ethnicity: lk_ethnicity; Experiment Measurement Technology: lk_exp_measurement_tech; Exposure Material: lk_exposure_material; Preferred Exposure Material Mapping: lk_exposure_material_pref_map; Exposure Process: lk_exposure_process; Preferred Exposure Process Mapping: lk_exposure_process_pref_map; Gender: lk_gender; Human Metabolome Database: lk_hmdb; Lab Test Name: lk_lab_test_name; Lab Test Panel Name: lk_lab_test_panel_name; PCR Expression Unit: lk_pcr_expression_unit; Personnel Role: lk_personnel_role; Plate Type: lk_plate_type; Preferred Time Unit: lk_preferred_time_unit; Protein Name: lk_protein_name; Protocol Type: lk_protocol_type; Public Repository: lk_public_repository; Race: lk_race; Reagent Type: lk_reagent_type; Release Status: lk_release_status; Research Focus: lk_research_focus; RNA Sequence Result: lk_rna_sequence_result; Unit Type: unit_type; Sample Type: lk_sample_type; Source Type: lk_source_type; Species: lk_species; Preferred Study Condition Mapping: lk_study_condition_pref_mapping; Study File Type: lk_study_file_type; Subject Location: lk_subject_location; Baseline (T0) Event: lk_t0_event; Temperature Unit: lk_temperature_unit; Time Unit: lk_time_unit; Titer Unit: lk_titer_unit; Transcript Type: lk_trancript_type; Unit of Measure: lk_unit_of_measure; Virus Strain: lk_virus_strain; Yes/No Options: lk_yes_no" assertion.
- ImmPort-Basic-Study-Design comment "ImmPort Basic Study Design template describes a study in terms of title, goals, endpoints, criteria for study participation, subject grouping (arms or cohorts), personnel, planned visits or encounters and protocols using a single worksheet. A study design and protocol should be uploaded first." assertion.
- ImmPort-Basic-Study-Design comment "A template that describes a study’s essential elements, including title, goals, endpoints, criteria for participation, subject grouping (arms or cohorts), personnel, planned visits, and protocols, all within a single worksheet. It defines key aspects such as purpose, grouping, schedule of events, and references. After defining a study in ImmPort, additional details can be added using the study_design_edit template. The Basic Study Design template is organized into several sections or compound templates to comprehensively capture study design and protocol information." assertion.
- ImmPort-Assessment comment "ImmPort Assessment template captures the Subject ID, Panel ID, User Defined ID, Planned Visit ID, Component Name, and Study Day for assessments." assertion.
- ImmPort-Assessment comment "A template that defines and annotates assessment panels and their components, which represent responses or results recorded in Case Report Forms (CRFs) linked to a study. It captures essential fields, including Subject ID, Panel ID, User Defined ID, Planned Visit ID, Component Name, and Study Day, allowing users to define both panels and components in a single form. Panels can be new or pre-defined, with any combination allowed as long as the Assessment Panel ID is unique within the template." assertion.
- ImmPort-Flow-Cytometry-Derived-Data comment "ImmPort Flow Cytometry Derived Data template describes Flow Cytometry results in a format to facilitate sharing of results." assertion.
- ImmPort-Flow-Cytometry-Derived-Data comment "A template that captures and annotates assay results for a sample by linking the sample, experiment, and interpreted results, providing a standardized format to facilitate the sharing of flow cytometry results." assertion.
- ImmPort-Reagents-Set comment "ImmPort Reagents Set template is designed to document groups of reagents used collectively in assays. This template allows researchers to define and organize reagents as sets, streamlining reference and documentation processes for assay workflows." assertion.
- ImmPort-Reagents-Set comment "An optional template designed to document groups of reagents used collectively in assays. It enables researchers to define and organize reagents as sets, streamlining reference and documentation processes for assay workflows. This same template also appears on the web with other names like 'Reagent Sets' and 'Reagent Set'." assertion.
- ImmPort-Assays-Treatment comment "ImmPort Assays Treatment template captures information about the treatments applied in vitro to experiment samples or biological samples. Three types of treatments are supported: amount of agent, duration, and temperature." assertion.
- ImmPort-Assays-Treatment comment "A template that documents in vitro modifications applied to samples, including the addition of molecules, temperature adjustments, and treatment durations. It supports three types of treatments: amount of agent, duration, and temperature. Treatments are required for experiment samples and optional for biological samples." assertion.
- ImmPort-Adverse-Events comment "ImmPort Adverse Events template captures the adverse events reported during a study." assertion.
- ImmPort-Adverse-Events comment "A template that reports adverse events recorded for subjects in a study." assertion.
- ImmPort-Intervention comment "ImmPort Intervention template captures the study indicated interventions, concomitant medications, and substance use for subjects in a study." assertion.
- ImmPort-Intervention comment "A template that captures the study indicated interventions, concomitant medications, and substance use for subjects in a study." assertion.
- ImmPort-Assessment-Panel comment "ImmPort Assessment Panel template captures the User Defined ID, Study ID, and Name for assessment panels." assertion.
- ImmPort-Assessment-Panel comment "A template that captures the User Defined ID, Study ID, and Name for assessment panels, allowing panels to be new or pre-defined in any combination. The only requirement is that the Assessment Panel ID must be unique within the template." assertion.
- ImmPort-Assessment-Component comment "ImmPort Assessment Component template captures the User Defined ID, Assessment Panel ID, Subject ID, Planned Visit ID, Name, and Study Day for assessment components." assertion.
- ImmPort-Assessment-Component comment "A template that captures essential details for assessment components, including User Defined ID, Assessment Panel ID, Subject ID, Planned Visit ID, Name, and Study Day. Assessments can be new or pre-defined, with any combination allowed, provided the Assessment Panel ID is unique within the template." assertion.
- ImmPort-Edit-Study-Design comment "Using the ImmPort Edit Study Design template, you can update a study design, add files, publications, or subjects. A study design should be uploaded first." assertion.
- ImmPort-Edit-Study-Design comment "An optional template that enables updates to a study's design after the initial design is uploaded, including adding files, publications, or subjects. It defines and annotates study elements, such as weblinks and publications, that can be modified or added later. This same template also appears on the web with other names like 'Study Design Edit'." assertion.
- ImmPort-Human-Subjects comment "ImmPort Subjects for Human template is designed to record detailed information about human subjects from whom samples are collected for analysis. Available in .xlsx format, this template facilitates standardized data entry specific to human subjects. " assertion.
- ImmPort-Human-Subjects comment "A template that records detailed information about human subjects from whom samples are collected for analysis. It defines and annotates key elements, including demographics and subject-arm links within a study. This same template also appears on the web with other names like 'Subject Humans' and 'Subject Human'." assertion.
- ImmPort-Animal-Subjects comment "ImmPort Subjects for Animal template is designed to record detailed information about animal subjects from whom samples are collected for analysis. Available in .xlsx format, this template facilitates standardized data entry specific to animal subjects. " assertion.
- ImmPort-Animal-Subjects comment "A template that defines and annotates key study subject elements, including demographics and subject-arm links within a study. This same template also appears on the web with other names like 'Subject Animals' and 'Subject Animal'." assertion.
- ImmPort-Clinical-Lab-Test comment "ImmPort Clinical Lab Test template captures the Lab Test User-Defined ID, Lab Panel ID, Biological Sample ID, Lab Test Name, Result Value and Result Unit for lab tests." assertion.
- ImmPort-Clinical-Lab-Test comment "A template that defines and annotates the lab test panels, the lab tests and results. This template combines the functions of the legacy lab test panels and lab test results templates into a single template. The biological sample and the lab test panel can be either new or pre-defined in this template. Any combination is acceptable. The only restriction is that the biological sample is the key to template and must be unique within the template. This same template also appears on the web with other names like 'Lab Tests'." assertion.
- ImmPort-RNA-Sequencing-Experiment comment "ImmPort RNA Sequencing Experiment template captures the samples, reagents, and results from a RNA Sequencing experiment." assertion.