Nanopublications

Matches in Nanopublications for { ?s <https://w3id.org/kpxl/grlc/sparql> ?o ?g. }

Showing items 1 to 100 of ±237 with 100 items per page.

get-field-value-annotations sparql "prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix foaf: <http://xmlns.com/foaf/0.1/> prefix oa: <http://www.w3.org/ns/oa#> select ?target_source ?field ?value ?np ?user ?pubkey where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np np:hasAssertion ?a . ?np np:hasPublicationInfo ?i . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } graph ?a { ?ann a oa:Annotation . ?ann oa:hasTarget ?target . ?target oa:hasSource ?target_source . ?target oa:hasSelector ?selector . ?selector a <http://example.org/FieldValueSelector> . ?selector <http://example.org/hasField> ?field . ?ann oa:hasBody ?body . ?body rdf:value ?value . } graph ?i { optional { ?sig npx:hasSignatureTarget ?np . ?sig npx:signedBy ?user . } } } order by desc(?date)" assertion.
get-field-value-annotations sparql "prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix foaf: <http://xmlns.com/foaf/0.1/> prefix oa: <http://www.w3.org/ns/oa#> select ?target_source ?field ?value ?np ?user where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np np:hasAssertion ?a . ?np np:hasPublicationInfo ?i . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } graph ?a { ?ann a oa:Annotation . ?ann oa:hasTarget ?target . ?target oa:hasSource ?target_source . ?target oa:hasSelector ?selector . ?selector a <http://example.org/FieldValueSelector> . ?selector <http://example.org/hasField> ?field . ?ann oa:hasBody ?body . ?body rdf:value ?value . } graph ?i { optional { ?sig npx:hasSignatureTarget ?np . ?sig npx:signedBy ?user . } } } order by desc(?date)" assertion.
get-classes-for-thing sparql "prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> select ?class ?np ?label ?date ?pubkey where { graph ?g { ?_thing_iri a ?class . } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np npa:hasGraph ?g . ?np dct:created ?date . optional { ?np rdfs:label ?label } } } order by desc(?date)" assertion.
get-instances sparql "prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> select ?instance ?np ?label ?date ?pubkey where { graph ?g { ?instance a ?_class_iri . } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np npa:hasGraph ?g . ?np dct:created ?date . optional { ?np rdfs:label ?label } } } limit 1000" assertion.
find-referencing-nanopubs sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> select ?np ?date ?pubkey where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np dct:created ?date . } filter exists { graph npa:graph { ?np npa:hasGraph ?g . } graph ?g { { { bind(?_ref_iri as ?subj) } union { bind(?_ref_iri as ?pred) } union { bind(?_ref_iri as ?obj) } } ?subj ?pred ?obj . } } } limit 1000" assertion.
find-referencing-nanopubs sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> select distinct ?np ?date ?pubkey where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np dct:created ?date . } graph npa:graph { ?np npa:hasGraph ?g . } graph ?g { { { ?_ref_iri ?pred ?obj . } union { ?subj ?_ref_iri ?obj . } union { ?subj ?pred ?_ref_iri . } } } } limit 1000" assertion.
get-instances sparql "prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix nt: <https://w3id.org/np/o/ntemplate/> select ?instance ?instanceLabel ?np ?npLabel ?date ?pubkey where { graph ?g { ?instance a ?_class_iri . } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np npa:hasGraph ?g . ?np np:hasPublicationInfo ?i . ?np dct:created ?date . optional { ?np rdfs:label ?npLabel . } } optional { graph ?g { ?instance rdfs:label ?instanceLabel1 . } } optional { graph ?g { ?instance dct:title ?instanceLabel2 . } } optional { graph ?i { ?instance rdfs:label ?instanceLabel3 . } } optional { graph ?i { ?instance nt:hasLabelFromApi ?instanceLabel4 . } } bind(coalesce(?instanceLabel1, ?instanceLabel2, ?instanceLabel3, ?instanceLabel4) as ?instanceLabel) } limit 1000" assertion.
get-classes-for-thing sparql "prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix nt: <https://w3id.org/np/o/ntemplate/> select ?class ?classLabel ?np ?npLabel ?date ?pubkey where { graph ?g { ?_thing_iri a ?class . } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np npa:hasGraph ?g . ?np np:hasPublicationInfo ?i . ?np dct:created ?date . optional { ?np rdfs:label ?npLabel } } optional { graph ?g { ?class rdfs:label ?classLabel1 . } } optional { graph ?g { ?class dct:title ?classLabel2 . } } optional { graph ?i { ?class rdfs:label ?classLabel3 . } } optional { graph ?i { ?class nt:hasLabelFromApi ?classLabel4 . } } bind(coalesce(?classLabel1, ?classLabel2, ?classLabel3, ?classLabel4) as ?classLabel) } limit 1000" assertion.
get-labels-for-thing sparql "prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix nt: <https://w3id.org/np/o/ntemplate/> select ?label ?relation ?np ?npLabel ?date ?pubkey where { graph ?g { ?_thing_iri ?relation ?label . values ?relation { rdfs:label dct:title nt:hasLabelFromApi } } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np npa:hasGraph ?g . ?np dct:created ?date . optional { ?np rdfs:label ?npLabel } } } limit 1000" assertion.
get-templates-with-uri sparql "prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix nt: <https://w3id.org/np/o/ntemplate/> select ?np ?npLabel ?date ?pubkey where { graph ?assertion { ?statement ?relation ?_thing_iri . values ?relation { rdf:subject rdf:predicate rdf:object nt:possibleValue } } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np np:hasAssertion ?assertion . ?np dct:created ?date . optional { ?np rdfs:label ?npLabel } } } limit 1000" assertion.
find-uri-references sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> select ?np ?graphpred ?subj ?pred ?obj ?date ?pubkey where { graph ?g { { { bind(?_ref_iri as ?subj) } union { bind(?_ref_iri as ?pred) } union { bind(?_ref_iri as ?obj) } } ?subj ?pred ?obj . } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np dct:created ?date . ?np ?__graphpred_iri ?g . bind(?__graphpred_iri as ?graphpred) values ?graphpred { np:hasAssertion np:hasProvenance np:hasPublicationInfo } } } limit 100" assertion.
find-uri-references sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> select ?np ?graphpred ?subj ?pred ?obj ?date ?pubkey where { graph ?g { { { bind(?_ref_iri as ?subj) } union { bind(?_ref_iri as ?pred) } union { bind(?_ref_iri as ?obj) } } ?subj ?pred ?obj . } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?__pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?__pubkey . } bind(?__pubkey as ?pubkey) ?np dct:created ?date . ?np ?__graphpred_iri ?g . bind(?__graphpred_iri as ?graphpred) values ?graphpred { np:hasAssertion np:hasProvenance np:hasPublicationInfo } } } limit 1000" assertion.
find-uri-references sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> select ?np ?graphpred ?subj ?pred ?obj ?date ?pubkey where { graph ?g { { { bind(?_ref_iri as ?subj) } union { bind(?_ref_iri as ?pred) } union { bind(?_ref_iri as ?obj) } } ?subj ?pred ?obj . } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?__pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?__pubkey . } bind(?__pubkey as ?pubkey) ?np dct:created ?date . ?np ?__graphpred_iri ?g . bind(?__graphpred_iri as ?graphpred) values ?graphpred { np:hasAssertion np:hasProvenance np:hasPublicationInfo } } } limit 100" assertion.
find-uri-references sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> select ?np ?graphpred ?subj ?pred ?obj ?date (?__pubkey as ?pubkey) where { graph ?g { { { bind(?_ref_iri as ?subj) } union { bind(?_ref_iri as ?pred) } union { bind(?_ref_iri as ?obj) } } ?subj ?pred ?obj . } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?__pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?__pubkey . } ?np dct:created ?date . ?np ?__graphpred_iri ?g . bind(?__graphpred_iri as ?graphpred) values ?graphpred { np:hasAssertion np:hasProvenance np:hasPublicationInfo } } } limit 1000" assertion.
find-uri-references sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> select ?np (?__graphpred_iri as ?graphpred) ?subj ?pred ?obj ?date (?__pubkey as ?pubkey) where { graph ?g { { { bind(?_ref_iri as ?subj) } union { bind(?_ref_iri as ?pred) } union { bind(?_ref_iri as ?obj) } } ?subj ?pred ?obj . } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?__pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?__pubkey . } ?np dct:created ?date . ?np ?__graphpred_iri ?g . values ?graphpred { np:hasAssertion np:hasProvenance np:hasPublicationInfo } } } limit 100" assertion.
find-uri-references sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> select ?np (?__graphpred_iri as ?graphpred) ?subj ?pred ?obj ?date (?__pubkey as ?pubkey) where { graph ?g { { { bind(?_ref_iri as ?subj) } union { bind(?_ref_iri as ?pred) } union { bind(?_ref_iri as ?obj) } } ?subj ?pred ?obj . } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?__pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?__pubkey . } ?np dct:created ?date . ?np ?__graphpred_iri ?g . values ?__graphpred_iri { np:hasAssertion np:hasProvenance np:hasPublicationInfo } } } limit 100" assertion.
get-latest-accepted-bdj sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix bibo: <http://purl.org/ontology/bibo/> select ?np ?label ?firstAuthor ?date where { values ?pubkey { "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37" "cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0" "170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6" } graph npa:graph { ?np dct:created ?date . ?np npa:hasValidSignatureForPublicKeyHash ?pubkey . ?np rdfs:label ?label . ?np np:hasPublicationInfo ?i . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKeyHash ?pubkey . } } graph ?i { ?np bibo:authorList ?authorList . ?authorList rdf:_1 ?firstAuthor . } } order by desc(?date) limit 100" assertion.
get-latest-accepted-ds sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix bibo: <http://purl.org/ontology/bibo/> select ?np ?label ?firstAuthor ?date where { values ?pubkey { "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37" "cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0" "170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6" } graph npa:graph { ?np dct:created ?date . ?np npa:hasValidSignatureForPublicKeyHash ?pubkey . ?np rdfs:label ?label . ?np np:hasPublicationInfo ?i . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKeyHash ?pubkey . } } graph ?i { ?np bibo:authorList ?authorList . ?authorList rdf:_1 ?firstAuthor . } } order by desc(?date) limit 100" assertion.
get-latest-ds-candidates sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix biolink: <https://w3id.org/biolink/vocab/> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix biodiv: <https://w3id.org/kpxl/biodiv/terms/> prefix prov: <http://www.w3.org/ns/prov#> select distinct ?np ?label ?pubkey ?date where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np rdfs:label ?label . values ?type { <https://w3id.org/kpxl/rel/terms/hasRelationTo> <https://w3id.org/kpxl/rel/terms/tendsToHaveRelationTo> <https://w3id.org/linkflows/superpattern/terms/SuperPatternInstance> <http://purl.org/petapico/o/hycl#AIDA-Sentence> <https://w3id.org/biolink/vocab/related_to> <http://www.w3.org/ns/mls#Run> } ?np npx:hasNanopubType ?type . ?np dct:creator ?__creator_iri . ?np dct:created ?date . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } } order by desc(?date)" assertion.
get-ds-reactions sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix biolink: <https://w3id.org/biolink/vocab/> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix biodiv: <https://w3id.org/kpxl/biodiv/terms/> prefix prov: <http://www.w3.org/ns/prov#> select distinct ?np ?label ?comment ?ref_np ?pubkey ?date where { graph npa:graph { ?ref_np npa:hasValidSignatureForPublicKey ?ref_pubkey . values ?ref_type { <https://w3id.org/kpxl/rel/terms/hasRelationTo> <https://w3id.org/kpxl/rel/terms/tendsToHaveRelationTo> <https://w3id.org/linkflows/superpattern/terms/SuperPatternInstance> <http://purl.org/petapico/o/hycl#AIDA-Sentence> <https://w3id.org/biolink/vocab/related_to> <http://www.w3.org/ns/mls#Run> } ?ref_np npx:hasNanopubType ?ref_type . filter not exists { ?ref_np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?ref_npx npx:invalidates ?ref_np ; npa:hasValidSignatureForPublicKey ?ref_pubkey . } graph npa:networkGraph { ?np npa:refersToNanopub ?ref_np . } ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np npx:hasNanopubType <http://purl.org/spar/cito/cites> . ?np rdfs:label ?label . ?np dct:created ?date . service <https://query.knowledgepixels.com/repo/type/2c1cce3f3152738c1009d59251409392aaaa3b0324bcb5fdfb4b7b944b8f0c18> { select ?np ?comment where { graph npa:graph { ?np np:hasAssertion ?a . } graph ?a { ?a rdfs:comment ?comment . } } } filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } } order by desc(?date)" assertion.
get-latest-rio-candidates sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix biolink: <https://w3id.org/biolink/vocab/> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix biodiv: <https://w3id.org/kpxl/biodiv/terms/> prefix prov: <http://www.w3.org/ns/prov#> select distinct ?np ?label ?pubkey ?date where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np rdfs:label ?label . values ?type { <https://w3id.org/kpxl/rel/terms/hasRelationTo> <https://w3id.org/kpxl/rel/terms/tendsToHaveRelationTo> <https://w3id.org/linkflows/superpattern/terms/SuperPatternInstance> <http://purl.org/petapico/o/hycl#AIDA-Sentence> <https://w3id.org/biolink/vocab/related_to> <http://www.w3.org/2004/02/skos/core#relatedMatch> } ?np npx:hasNanopubType ?type . ?np dct:creator ?__creator_iri . ?np dct:created ?date . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } } order by desc(?date)" assertion.
get-nanopubs-by-type sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix prov: <http://www.w3.org/ns/prov#> select ?np ?label ?pubkey ?date where { graph npa:graph { ?np npx:hasNanopubType ?_type_iri . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } optional { ?np rdfs:label ?label . } ?np dct:created ?date . } }" assertion.
get-introducing-nanopub sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix prov: <http://www.w3.org/ns/prov#> select ?np ?label ?pubkey ?date where { graph npa:graph { ?np npx:introduces ?_thing_iri . ?np npa:hasValidSignatureForPublicKey ?pubkey . optional { ?np rdfs:label ?label . } ?np dct:created ?date . } }" assertion.
fulltext-search-on-labels sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix dct: <http://purl.org/dc/terms/> prefix search: <http://www.openrdf.org/contrib/lucenesail#> select ?np ?label ?date where { graph npa:graph { ?np rdfs:label ?label . ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np dct:created ?date . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } ?np search:matches [ search:query ?_query ; search:property rdfs:label ; search:score ?score ; search:snippet ?snippet ] . } limit 100" assertion.
fulltext-search-on-labels sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix dct: <http://purl.org/dc/terms/> prefix search: <http://www.openrdf.org/contrib/lucenesail#> select ?np ?label ?date where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?__pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?__pubkey . } optional { ?np rdfs:label ?label . } ?np dct:created ?date . } ?np search:matches [ search:query ?_query ; search:property rdfs:label ; search:score ?score ; search:snippet ?snippet ] . } limit 100" assertion.
find-things sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix dct: <http://purl.org/dc/terms/> prefix search: <http://www.openrdf.org/contrib/lucenesail#> select ?thing ?label ?description ?np ?pubkey ?date where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np dct:created ?date . ?np npx:introduces|npx:describes ?thing . ?np rdfs:label ?label . optional { ?np dct:description ?description . } ?np np:hasAssertion ?a . } ?np search:matches [ search:query ?_query ; search:property rdfs:label ; search:score ?score ; search:snippet ?snippet ] . } limit 100" assertion.
find-things sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix dct: <http://purl.org/dc/terms/> prefix search: <http://www.openrdf.org/contrib/lucenesail#> select ?thing ?label ?description ?np ?pubkey ?date where { graph npa:graph { ?np npx:hasNanopubType ?__type_iri . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np dct:created ?date . ?np npx:introduces|npx:describes ?thing . ?np rdfs:label ?label . optional { ?np dct:description ?description . } ?np np:hasAssertion ?a . } ?np search:matches [ search:query ?_query ; search:property rdfs:label ; search:score ?score ; search:snippet ?snippet ] . } limit 100" assertion.
get-fer-pref-ids sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix fip: <https://w3id.org/fair/fip/terms/> select ?resource_pref_id ?reslabel ?res_np_date ?resourcetype ?res_np ?pubkey_hash ?previous_np where { graph npa:graph { ?res_np npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . filter not exists { ?npx npx:invalidates ?res_np ; npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . } ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource . ?res_np (npx:introduces|npx:describes) ?resource_pref_id . ?res_np dct:created ?res_np_date . ?res_np rdfs:label ?reslabel . bind( exists { ?res_np npx:hasNanopubType fip:Available-FAIR-Enabling-Resource } as ?available_resource ) bind( exists { ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource-to-be-Developed } as ?tobedeveloped_resource ) bind(if(?available_resource, fip:Available-FAIR-Enabling-Resource, if(?tobedeveloped_resource, fip:FAIR-Enabling-Resource-to-be-Developed, fip:FAIR-Enabling-Resource ) ) as ?resourcetype ) } { select * { graph npa:networkGraph { ?res_np npx:supersedes* ?previous_np . } } } }" assertion.
get-fer-pref-ids sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix fip: <https://w3id.org/fair/fip/terms/> select ?resource_pref_id ?res ?reslabel ?res_np_date ?resourcetype ?res_np ?pubkey_hash ?previous where { graph npa:graph { ?res_np npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . filter not exists { ?npx npx:invalidates ?res_np ; npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . } ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource . ?res_np (npx:introduces|npx:describes) ?resource_pref_id . bind(replace(str(?resource_pref_id), "^.*?(#|/)([^/#]*/?[^/#]*)/?$", "$2") as ?res) ?res_np dct:created ?res_np_date . ?res_np rdfs:label ?reslabel . bind( exists { ?res_np npx:hasNanopubType fip:Available-FAIR-Enabling-Resource } as ?available_resource ) bind( exists { ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource-to-be-Developed } as ?tobedeveloped_resource ) bind(if(?available_resource, fip:Available-FAIR-Enabling-Resource, if(?tobedeveloped_resource, fip:FAIR-Enabling-Resource-to-be-Developed, fip:FAIR-Enabling-Resource ) ) as ?resourcetype ) } { select * { graph npa:networkGraph { ?res_np npx:supersedes* ?previous . } } } }" assertion.
get-fer-pref-ids sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix fip: <https://w3id.org/fair/fip/terms/> select ?resource_pref_id ?res ?reslabel ?res_np_date ?resourcetype ?res_np ?pubkey_hash ?np_pre where { graph npa:graph { ?res_np npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . filter not exists { ?npx npx:invalidates ?res_np ; npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . } ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource . ?res_np (npx:introduces|npx:describes) ?resource_pref_id . bind(replace(str(?resource_pref_id), "^.*?(#|/)([^/#]*/?[^/#]*)/?$", "$2") as ?res) ?res_np dct:created ?res_np_date . ?res_np rdfs:label ?reslabel . bind( exists { ?res_np npx:hasNanopubType fip:Available-FAIR-Enabling-Resource } as ?available_resource ) bind( exists { ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource-to-be-Developed } as ?tobedeveloped_resource ) bind(if(?available_resource, fip:Available-FAIR-Enabling-Resource, if(?tobedeveloped_resource, fip:FAIR-Enabling-Resource-to-be-Developed, fip:FAIR-Enabling-Resource ) ) as ?resourcetype ) } { select * { graph npa:networkGraph { ?res_np npx:supersedes* ?np_pre . } } } }" assertion.
get-fer-ids sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix fip: <https://w3id.org/fair/fip/terms/> prefix dct: <http://purl.org/dc/terms/> prefix dce: <http://purl.org/dc/elements/1.1/> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix np: <http://www.nanopub.org/nschema#> prefix dcat: <https://www.w3.org/ns/dcat#> select distinct ?resource_id ?np_pre ?pubkey_hash where { graph npa:graph { ?np_pre npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . ?np_pre np:hasAssertion ?res_a . ?np_pre (npx:introduces|npx:describes) ?resource_id . values ?resourcetype { fip:Available-FAIR-Enabling-Resource fip:FAIR-Enabling-Resource-to-be-Developed fip:FAIR-Enabling-Resource } ?np_pre npx:hasNanopubType ?resourcetype . } }" assertion.
get-fer-pref-ids sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix fip: <https://w3id.org/fair/fip/terms/> select ?resource_pref_id ?res ?reslabel ?res_np_date ?resourcetype ?res_np ?np_pre ?pubkey_hash where { graph npa:graph { ?res_np npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . filter not exists { ?npx npx:invalidates ?res_np ; npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . } ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource . ?res_np (npx:introduces|npx:describes) ?resource_pref_id . bind(replace(str(?resource_pref_id), "^.*?(#|/)([^/#]*/?[^/#]*)/?$", "$2") as ?res) ?res_np dct:created ?res_np_date . ?res_np rdfs:label ?reslabel . bind( exists { ?res_np npx:hasNanopubType fip:Available-FAIR-Enabling-Resource } as ?available_resource ) bind( exists { ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource-to-be-Developed } as ?tobedeveloped_resource ) bind(if(?available_resource, fip:Available-FAIR-Enabling-Resource, if(?tobedeveloped_resource, fip:FAIR-Enabling-Resource-to-be-Developed, fip:FAIR-Enabling-Resource ) ) as ?resourcetype ) } { select * { graph npa:networkGraph { ?res_np npx:supersedes* ?np_pre . } } } }" assertion.
get-fer-pref-ids sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix fip: <https://w3id.org/fair/fip/terms/> select ?resource_pref_id ?res ?reslabel ?res_np_date ?resourcetype ?res_np ?np_pre ?pubkey_hash ?np_pre_pubkey_hash where { graph npa:graph { ?res_np npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . filter not exists { ?npx npx:invalidates ?res_np ; npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . } ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource . ?res_np (npx:introduces|npx:describes) ?resource_pref_id . bind(replace(str(?resource_pref_id), "^.*?(#|/)([^/#]*/?[^/#]*)/?$", "$2") as ?res) ?res_np dct:created ?res_np_date . ?res_np rdfs:label ?reslabel . bind( exists { ?res_np npx:hasNanopubType fip:Available-FAIR-Enabling-Resource } as ?available_resource ) bind( exists { ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource-to-be-Developed } as ?tobedeveloped_resource ) bind(if(?available_resource, fip:Available-FAIR-Enabling-Resource, if(?tobedeveloped_resource, fip:FAIR-Enabling-Resource-to-be-Developed, fip:FAIR-Enabling-Resource ) ) as ?resourcetype ) } { select * { graph npa:networkGraph { ?res_np npx:supersedes* ?np_pre . } } } bind(concat(str(?np_pre), " ", ?pubkey_hash) as ?np_pre_pubkey_hash) }" assertion.
get-fer-ids sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix fip: <https://w3id.org/fair/fip/terms/> prefix dct: <http://purl.org/dc/terms/> prefix dce: <http://purl.org/dc/elements/1.1/> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix np: <http://www.nanopub.org/nschema#> prefix dcat: <https://www.w3.org/ns/dcat#> select distinct ?resource_id ?np_pre ?pubkey_hash ?np_pre_pubkey_hash where { graph npa:graph { ?np_pre npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . ?np_pre np:hasAssertion ?res_a . ?np_pre (npx:introduces|npx:describes) ?resource_id . values ?resourcetype { fip:Available-FAIR-Enabling-Resource fip:FAIR-Enabling-Resource-to-be-Developed fip:FAIR-Enabling-Resource } ?np_pre npx:hasNanopubType ?resourcetype . } bind(concat(str(?np_pre), " ", ?pubkey_hash) as ?np_pre_pubkey_hash) }" assertion.
get-fer-pref-ids sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix fip: <https://w3id.org/fair/fip/terms/> select ?resource_pref_id ?res ?reslabel ?res_np_date ?resourcetype ?res_np ?np_pre_pubkey_hash where { graph npa:graph { ?res_np npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . filter not exists { ?npx npx:invalidates ?res_np ; npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . } ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource . ?res_np (npx:introduces|npx:describes) ?resource_pref_id . bind(replace(str(?resource_pref_id), "^.*?(#|/)([^/#]*/?[^/#]*)/?$", "$2") as ?res) ?res_np dct:created ?res_np_date . ?res_np rdfs:label ?reslabel . bind( exists { ?res_np npx:hasNanopubType fip:Available-FAIR-Enabling-Resource } as ?available_resource ) bind( exists { ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource-to-be-Developed } as ?tobedeveloped_resource ) bind(if(?available_resource, fip:Available-FAIR-Enabling-Resource, if(?tobedeveloped_resource, fip:FAIR-Enabling-Resource-to-be-Developed, fip:FAIR-Enabling-Resource ) ) as ?resourcetype ) } { select * { graph npa:networkGraph { ?res_np npx:supersedes* ?np_pre . } } } bind(concat(str(?np_pre), " ", ?pubkey_hash) as ?np_pre_pubkey_hash) }" assertion.
get-fer-pref-ids sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix fip: <https://w3id.org/fair/fip/terms/> select distinct ?resource_pref_id ?res ?reslabel ?res_np_date ?resourcetype ?res_np ?np_pre ?pubkey_hash ?np_pre_pubkey_hash where { graph npa:graph { ?res_np npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . filter not exists { ?npx npx:invalidates ?res_np ; npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . } ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource . ?res_np (npx:introduces|npx:describes) ?resource_pref_id . bind(replace(str(?resource_pref_id), "^.*?(#|/)([^/#]*/?[^/#]*)/?$", "$2") as ?res) ?res_np dct:created ?res_np_date . ?res_np rdfs:label ?reslabel . bind( exists { ?res_np npx:hasNanopubType fip:Available-FAIR-Enabling-Resource } as ?available_resource ) bind( exists { ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource-to-be-Developed } as ?tobedeveloped_resource ) bind(if(?available_resource, fip:Available-FAIR-Enabling-Resource, if(?tobedeveloped_resource, fip:FAIR-Enabling-Resource-to-be-Developed, fip:FAIR-Enabling-Resource ) ) as ?resourcetype ) } { select * { graph npa:networkGraph { ?res_np npx:supersedes* ?np_pre . } } } bind(concat(str(?np_pre), " ", ?pubkey_hash) as ?np_pre_pubkey_hash) } order by ?resource_pref_id ?res_np" assertion.
get-fer-ids sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix fip: <https://w3id.org/fair/fip/terms/> prefix dct: <http://purl.org/dc/terms/> prefix dce: <http://purl.org/dc/elements/1.1/> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix np: <http://www.nanopub.org/nschema#> prefix dcat: <https://www.w3.org/ns/dcat#> select distinct ?resource_id ?np_pre ?pubkey_hash ?np_pre_pubkey_hash where { graph npa:graph { ?np_pre npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . ?np_pre np:hasAssertion ?res_a . ?np_pre (npx:introduces|npx:describes) ?resource_id . values ?resourcetype { fip:Available-FAIR-Enabling-Resource fip:FAIR-Enabling-Resource-to-be-Developed fip:FAIR-Enabling-Resource } ?np_pre npx:hasNanopubType ?resourcetype . } bind(concat(str(?np_pre), " ", ?pubkey_hash) as ?np_pre_pubkey_hash) } order by ?resource_id ?np_pre" assertion.
get-gff-qualifications sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> select distinct ?res_np ?qualification_np where { values ?qpubkey { "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCtpcftn7kbe6toJbOTDQaCcCssEFSWqt6J4rZ02w+TfY7/eIOgJZYOlpL6G3AzO2RNmVYWRPSlMiykaFuaRuBitvk1GKfGdprfZbvXwmeOxpqCTRBQX9EnFyQyd+Ra/ajfw/UsG8skeu1xnUEpnQbpgbQYc/fvhJNN0UwEc77mOwIDAQAB"^^xsd:string "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQDO4xkU+/dGujq1raR66QtRqquMxiJ9hm2uzc2uBj7bCBBRnWhTw7M8f77BqAFHShgxqxYTr2do7/tVmoKeM51ISyttxWrh9ebZRoz5o6Muxt7HyA4sLHAmnixeZ5VJfZzsKAmVN23Y2ZiCqMoXjtcp5jO2lOC0AXaGPftnaA8b9QIDAQAB"^^xsd:string "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCFntPrMZqvg2kVhCNArNnEn37ddXGwZ/0r4C8CS4lDry7C7YkYgng9yb0UMZQUHiTVkR/5A4m/xjE+Vy+AnwcWUeB75SfGZjE5ylI6VeHjTHi9+2hh2PHYIWnkhU4WHl3COEnxSSa/VouvPzZ2BIWLH6fTrq7NNL3RF5hGegGG0QIDAQAB"^^xsd:string } graph npa:graph { ?qualification_np npa:hasValidSignatureForPublicKey ?qpubkey . filter not exists { ?qualification_np_x npx:invalidates ?qualification_np ; npa:hasValidSignatureForPublicKey ?qpubkey . } ?qualification_np np:hasAssertion ?qa . } graph ?qa { ?qualifier npx:qualifies ?res_np . } } order by ?res_np ?qualification_np" assertion.
get-fer-pref-ids sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix fip: <https://w3id.org/fair/fip/terms/> select distinct ?resource_pref_id ?res ?reslabel ?res_np_date ?resourcetype ?res_np ?np_pre ?pubkey_hash ?np_pre_pubkey_hash where { graph npa:graph { ?res_np npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . filter not exists { ?npx npx:invalidates ?res_np ; npa:hasValidSignatureForPublicKeyHash ?pubkey_hash . } ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource . ?res_np (npx:introduces|npx:describes) ?resource_pref_id . bind(replace(str(?resource_pref_id), "^.*?(#|/)([^/#]*/?[^/#]*)/?$", "$2") as ?res) ?res_np dct:created ?res_np_date . ?res_np rdfs:label ?reslabel . bind( exists { ?res_np npx:hasNanopubType fip:Available-FAIR-Enabling-Resource } as ?available_resource ) bind( exists { ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource-to-be-Developed } as ?tobedeveloped_resource ) bind(if(?available_resource, fip:Available-FAIR-Enabling-Resource, if(?tobedeveloped_resource, fip:FAIR-Enabling-Resource-to-be-Developed, fip:FAIR-Enabling-Resource ) ) as ?resourcetype ) } optional { select * { graph npa:networkGraph { ?res_np npx:supersedes* ?np_pre_x . } } } bind(coalesce(?np_pre_x, ?res_np) as ?np_pre) bind(concat(str(?np_pre), " ", ?pubkey_hash) as ?np_pre_pubkey_hash) } order by ?resource_pref_id ?res_np" assertion.
get-fer-pref-ids sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix fip: <https://w3id.org/fair/fip/terms/> select distinct ?resource_pref_id ?res ?reslabel ?res_np_date ?resourcetype ?res_np ?np_pre ?pubkey_hash ?np_pre_pubkey_hash where { graph npa:graph { ?res_np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?res_np ; npa:hasValidSignatureForPublicKey ?pubkey . } bind(sha256(?pubkey) as ?pubkey_hash) ## workaround due to https://github.com/knowledgepixels/nanopub-query/issues/14 ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource . ?res_np (npx:introduces|npx:describes) ?resource_pref_id . bind(replace(str(?resource_pref_id), "^.*?(#|/)([^/#]*/?[^/#]*)/?$", "$2") as ?res) ?res_np dct:created ?res_np_date . ?res_np rdfs:label ?reslabel . bind( exists { ?res_np npx:hasNanopubType fip:Available-FAIR-Enabling-Resource } as ?available_resource ) bind( exists { ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource-to-be-Developed } as ?tobedeveloped_resource ) bind(if(?available_resource, fip:Available-FAIR-Enabling-Resource, if(?tobedeveloped_resource, fip:FAIR-Enabling-Resource-to-be-Developed, fip:FAIR-Enabling-Resource ) ) as ?resourcetype ) } optional { select * { graph npa:networkGraph { ?res_np npx:supersedes* ?np_pre_x . } } } bind(coalesce(?np_pre_x, ?res_np) as ?np_pre) bind(concat(str(?np_pre), " ", ?pubkey_hash) as ?np_pre_pubkey_hash) } order by ?resource_pref_id ?res_np" assertion.
get-fer-pref-ids-extra-available sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix fip: <https://w3id.org/fair/fip/terms/> select distinct ?resource_pref_id ?res ?reslabel ?res_np_date ?resourcetype ?res_np ?np_pre ?pubkey_hash ?np_pre_pubkey_hash where { graph npa:graph { ?res_np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?res_np ; npa:hasValidSignatureForPublicKey ?pubkey . } bind(sha256(?pubkey) as ?pubkey_hash) ## workaround due to https://github.com/knowledgepixels/nanopub-query/issues/14 ?res_np npx:hasNanopubType fip:Available-FAIR-Enabling-Resource . filter not exists { ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource . } ?res_np (npx:introduces|npx:describes) ?resource_pref_id . bind(replace(str(?resource_pref_id), "^.*?(#|/)([^/#]*/?[^/#]*)/?$", "$2") as ?res) ?res_np dct:created ?res_np_date . ?res_np rdfs:label ?reslabel . bind(fip:Available-FAIR-Enabling-Resource as ?resourcetype) } optional { select * { graph npa:networkGraph { ?res_np npx:supersedes* ?np_pre_x . } } } bind(coalesce(?np_pre_x, ?res_np) as ?np_pre) bind(concat(str(?np_pre), " ", ?pubkey_hash) as ?np_pre_pubkey_hash) } order by ?resource_pref_id ?res_np" assertion.
get-fer-pref-ids-extra-to-be-developed sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix fip: <https://w3id.org/fair/fip/terms/> select distinct ?resource_pref_id ?res ?reslabel ?res_np_date ?resourcetype ?res_np ?np_pre ?pubkey_hash ?np_pre_pubkey_hash where { graph npa:graph { ?res_np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?res_np ; npa:hasValidSignatureForPublicKey ?pubkey . } bind(sha256(?pubkey) as ?pubkey_hash) ## workaround due to https://github.com/knowledgepixels/nanopub-query/issues/14 ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource-to-be-Developed . filter not exists { ?res_np npx:hasNanopubType fip:FAIR-Enabling-Resource . } ?res_np (npx:introduces|npx:describes) ?resource_pref_id . bind(replace(str(?resource_pref_id), "^.*?(#|/)([^/#]*/?[^/#]*)/?$", "$2") as ?res) ?res_np dct:created ?res_np_date . ?res_np rdfs:label ?reslabel . bind(fip:FAIR-Enabling-Resource-to-be-Developed as ?resourcetype) } optional { select * { graph npa:networkGraph { ?res_np npx:supersedes* ?np_pre_x . } } } bind(coalesce(?np_pre_x, ?res_np) as ?np_pre) bind(concat(str(?np_pre), " ", ?pubkey_hash) as ?np_pre_pubkey_hash) } order by ?resource_pref_id ?res_np" assertion.
get-fip-decl-in-index sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix fip: <https://w3id.org/fair/fip/terms/> prefix dct: <http://purl.org/dc/terms/> prefix dce: <http://purl.org/dc/elements/1.1/> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix np: <http://www.nanopub.org/nschema#> select ?fip_index ?fip_title ?decl_np where { graph npa:graph { ?fip_index npx:hasNanopubType npx:NanopubIndex . ?fip_index npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?index_np_x npx:invalidates ?fip_index ; npa:hasValidSignatureForPublicKey ?pubkey . } ?fip_index np:hasAssertion ?index_a . ?fip_index rdfs:label ?fip_title . ?fip_index dct:created ?index_date . ?decl_np npx:hasNanopubType fip:FIP-Declaration . ?decl_np dct:created ?date . } graph ?index_a { ?fip_index npx:includesElement ?decl_np . } filter not exists { graph npa:graph { ?fip_newer_index npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?fip_newer_index_x npx:invalidates ?fip_newer_index ; npa:hasValidSignatureForPublicKey ?pubkey . } ?fip_newer_index dct:created ?newer_date . # Matching on the title string is an ugly hack: ?fip_newer_index rdfs:label ?fip_title . } filter(?newer_date > ?index_date). } }" assertion.
get-fip-decl-in-index sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix fip: <https://w3id.org/fair/fip/terms/> prefix dct: <http://purl.org/dc/terms/> prefix dce: <http://purl.org/dc/elements/1.1/> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix np: <http://www.nanopub.org/nschema#> select ?fip_index ?fip_title ?decl_np where { graph npa:graph { ?fip_index npx:hasNanopubType npx:NanopubIndex . ?fip_index npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?index_np_x npx:invalidates ?fip_index ; npa:hasValidSignatureForPublicKey ?pubkey . } ?fip_index np:hasAssertion ?index_a . ?fip_index rdfs:label ?fip_title . ?fip_index dct:created ?index_date . ?decl_np npa:hasValidSignatureForPublicKey ?decl_pubkey . filter not exists { ?decl_np_x npx:invalidates ?decl_np ; npa:hasValidSignatureForPublicKey ?decl_pubkey . } ?decl_np npx:hasNanopubType fip:FIP-Declaration . ?decl_np dct:created ?date . } graph ?index_a { ?fip_index npx:includesElement ?decl_np . } filter not exists { graph npa:graph { ?fip_newer_index npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?fip_newer_index_x npx:invalidates ?fip_newer_index ; npa:hasValidSignatureForPublicKey ?pubkey . } ?fip_newer_index dct:created ?newer_date . # Matching on the title string is an ugly hack: ?fip_newer_index rdfs:label ?fip_title . } filter(?newer_date > ?index_date). } }" assertion.
get-fip-decl-details sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix fip: <https://w3id.org/fair/fip/terms/> prefix dct: <http://purl.org/dc/terms/> prefix dce: <http://purl.org/dc/elements/1.1/> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix np: <http://www.nanopub.org/nschema#> prefix dcat: <https://www.w3.org/ns/dcat#> select ?decl_np ?community ?c ?question ?q ?sort ?nochoice ?decl ?rel ?resource_id_used ?startdate ?enddate ?date where { graph npa:graph { ?decl_np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?decl_np_x npx:invalidates ?decl_np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?decl_np npx:hasNanopubType fip:FIP-Declaration . ?decl_np dct:created ?date . ?decl_np np:hasAssertion ?assertion . } graph ?assertion { ?decl a fip:FIP-Declaration . ?decl fip:refers-to-question ?question . { { ?decl fip:declares-current-use-of ?resource_id_used . bind(fip:declares-current-use-of as ?rel) } union { ?decl fip:declares-planned-use-of ?resource_id_used . bind(fip:declares-planned-use-of as ?rel) } union { ?decl fip:declares-planned-replacement-of ?resource_id_used . bind(fip:declares-planned-replacement-of as ?rel) } union { ?decl fip:declares-replacement-from ?resource_id_used . bind(fip:declares-replacement-from as ?rel) } # unofficial union { ?decl fip:declares-replacement-to ?resource_id_used . bind(fip:declares-replacement-to as ?rel) } # unofficial } # grlc gives an error for some reason if these two optional statements are at the end of the graph block: optional { ?decl dcat:startDate ?startdate . } optional { ?decl dcat:endDate ?enddate . } ?decl fip:declared-by ?community . } bind (replace(str(?community), ".*#", "") as ?c) bind (replace(str(?supercommunity), ".*#", "") as ?sc) bind (replace(str(?question), "^.*-([^-MD]+(-[MD]+)?)$", "$1") as ?q) bind (concat(replace(?q, "F|M", "0"), "x") as ?sort) bind ("" as ?nochoice) }" assertion.
get-fip-supercommunities sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix fip: <https://w3id.org/fair/fip/terms/> select distinct ?community (group_concat(distinct ?supercommunity; separator=" ") as ?supercommunities) (group_concat(distinct ?sc; separator=" ") as ?sc) where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np npx:hasNanopubType fip:FAIR-Implementation-Community . ?np (npx:introduces|npx:describes) ?community . ?np np:hasAssertion ?a . } graph ?a { ?community dct:isPartOf ?supercommunity . } optional { graph npa:graph { ?disapproval np:hasAssertion ?da . ?disapproval npa:hasValidSignatureForPublicKey ?dpubkey . filter not exists { ?disapproval_x npx:invalidates ?disapproval ; npa:hasValidSignatureForPublicKey ?dpubkey . } } graph <https://w3id.org/np/RAkVk6aKWsmgcuKtPA7OSp2h-GbDfx8xrz_kJAAgY8Xa4#assertion> { ?dpubkeys npx:hasPublicKey ?dpubkey . } graph ?da { ?dsomebody ( npx:disapproves-of | npx:disapprovesOf ) ?np . } } filter(!bound(?disapproval)) # for some reason this is much faster than "filter not exists" bind(replace(str(?supercommunity), ".*#", "") as ?sc) } group by ?community" assertion.
get-all-users sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npx: <http://purl.org/nanopub/x/> prefix npa: <http://purl.org/nanopub/admin/> prefix dct: <http://purl.org/dc/terms/> prefix foaf: <http://xmlns.com/foaf/0.1/> select ?user ?name ?intronp ?date ?pubkey where { graph npa:graph { ?intronp npx:hasNanopubType npx:declaredBy . ?intronp npa:hasValidSignatureForPublicKey ?intronp_pubkey . filter not exists { ?intronp_x npx:invalidates ?intronp ; npa:hasValidSignatureForPublicKey ?intronp_pubkey . } ?intronp np:hasAssertion ?a . ?intronp dct:created ?date . } graph ?a { ?keydeclaration npx:declaredBy ?user . ?keydeclaration npx:hasPublicKey ?pubkey . optional { ?user foaf:name ?name . } } } order by ?user desc(?date)" assertion.
find-gofair-qualified-things sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> select distinct ?thing ?label ?description ?np ?date ?pubkey ?retraction ?newversion ?qualifier ?qualification_np where { graph npa:graph { ?np npx:hasNanopubType ?__type_iri . ?np npa:hasValidSignatureForPublicKey ?pubkey . optional { ?retraction npx:retracts ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } optional { ?newversion npx:supersedes ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np (npx:introduces|npx:describes) ?thing . ?np rdfs:label ?label . ?np dct:description ?description . ?np dct:created ?date . filter(str(?date) > "2022") } bind(concat(" ",lcase(str(?label))," ",lcase(str(?description))," ") as ?text) filter( contains(?text, lcase(str(?_searchterm))) ) optional { graph npa:graph { ?disapproval np:hasAssertion ?da . ?disapproval npa:hasValidSignatureForPublicKey ?dpubkey . filter not exists { ?disapproval_x npx:invalidates ?disapproval ; npa:hasValidSignatureForPublicKey ?dpubkey . } } graph <https://w3id.org/np/RAkVk6aKWsmgcuKtPA7OSp2h-GbDfx8xrz_kJAAgY8Xa4#assertion> { ?dpubkeys npx:hasPublicKey ?dpubkey . } graph ?da { ?dsomebody ( npx:disapproves-of | npx:disapprovesOf ) ?np . } } filter(!bound(?disapproval)) # Faster than "filter not exists" for some reason optional { graph npa:graph { ?qualification_np npx:hasNanopubType npx:qualifies . ?qualification_np np:hasAssertion ?qa . ?qualification_np npa:hasValidSignatureForPublicKey ?qpubkey . filter not exists { ?qualification_np_x npx:invalidates ?qualification_np ; npa:hasValidSignatureForPublicKey ?qpubkey . } } graph <https://w3id.org/np/RAkVk6aKWsmgcuKtPA7OSp2h-GbDfx8xrz_kJAAgY8Xa4#assertion> { ?qpubkeys npx:hasPublicKey ?qpubkey . } graph ?qa { ?qualifier npx:qualifies ?np . } } } order by asc(?label)" assertion.
get-fip-decl-in-index sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix fip: <https://w3id.org/fair/fip/terms/> prefix dct: <http://purl.org/dc/terms/> prefix dce: <http://purl.org/dc/elements/1.1/> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix np: <http://www.nanopub.org/nschema#> select ?fip_index ?fip_title ?decl_np where { graph npa:graph { ?fip_index npx:hasNanopubType npx:NanopubIndex . ?fip_index npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?index_np_x npx:invalidates ?fip_index ; npa:hasValidSignatureForPublicKey ?pubkey . } ?fip_index np:hasAssertion ?index_a . ?fip_index rdfs:label ?fip_title . ?fip_index dct:created ?index_date . ?decl_np npa:hasValidSignatureForPublicKey ?decl_pubkey . filter not exists { ?decl_np_x npx:invalidates ?decl_np ; npa:hasValidSignatureForPublicKey ?decl_pubkey . } ?decl_np npx:hasNanopubType fip:FIP-Declaration . ?decl_np dct:created ?date . } graph ?index_a { ?fip_index npx:includesElement ?decl_np . } filter not exists { graph npa:graph { # Moving this to a separate graph for performance reasons with RDF4J LMDB engine # Matching on the title string is an ugly hack: ?fip_newer_index rdfs:label ?fip_title . } graph npa:graph { ?fip_newer_index npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?fip_newer_index_x npx:invalidates ?fip_newer_index ; npa:hasValidSignatureForPublicKey ?pubkey . } ?fip_newer_index dct:created ?newer_date . } filter(?newer_date > ?index_date). } }" assertion.
query sparql "#+ endpoint: https://query.knowledgepixels.com/repo/full prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> select ?count ?checksum where { graph npa:graph { npa:thisRepo npa:hasNanpubCount ?count ; npa:hasNanopubChecksum ?checksum . } }" assertion.
query sparql "prefix dbo: <http://dbpedia.org/ontology/> prefix dbp: <http://dbpedia.org/property/> prefix schema: <http://schema.org/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> select ?band ?album where { ?band rdf:type dbo:Band . ?album rdf:type schema:MusicAlbum . ?band dbo:genre ?_genre_iri . ?album dbp:artist ?band . } limit 100" assertion.
query sparql "prefix dbo: <http://dbpedia.org/ontology/> prefix dbp: <http://dbpedia.org/property/> prefix schema: <http://schema.org/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> select ?band ?album where { ?band rdf:type dbo:Band . ?album rdf:type schema:MusicAlbum . ?band dbo:genre ?__genre_iri . ?album dbp:artist ?band . } limit 100" assertion.
query sparql "prefix dbo: <http://dbpedia.org/ontology/> prefix dbp: <http://dbpedia.org/property/> prefix schema: <http://schema.org/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> select ?band ?album where { ?band rdf:type dbo:Band . ?album rdf:type schema:MusicAlbum . ?band dbo:genre ?__genre_iri . ?album dbp:artist ?band . } limit 100" assertion.
query sparql "prefix dbo: <http://dbpedia.org/ontology/> prefix dbp: <http://dbpedia.org/property/> prefix schema: <http://schema.org/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> select ?band ?album where { ?band rdf:type dbo:Band . ?album rdf:type schema:MusicAlbum . ?band dbo:genre ?__genre_iri . ?album dbp:artist ?band . } limit 100" assertion.
query sparql "prefix dbo: <http://dbpedia.org/ontology/> prefix dbp: <http://dbpedia.org/property/> prefix schema: <http://schema.org/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> select ?band ?album where { ?band rdf:type dbo:Band . ?album rdf:type schema:MusicAlbum . ?band dbo:genre ?__genre_iri . ?album dbp:artist ?band . } limit 100" assertion.
get-latest-bdj-nanopubs-by-author sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix oa: <http://www.w3.org/ns/oa#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix pav: <http://purl.org/pav/> prefix bibo: <http://purl.org/ontology/bibo/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> select distinct ?np ?label (coalesce(?firstAuthor, min(?author), min(?creator)) as ?mainAuthor) (if(if(count(distinct ?author)>0, count(distinct ?author), count(distinct ?creator)) > 1, " et al.", "") as ?authorEtAl) ?timestamp (substr(str(?timestamp), 0, 11) as ?date) where { graph npa:graph { ?np dct:created ?timestamp . ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np rdfs:label ?label . ?np np:hasAssertion ?a . ?np np:hasPublicationInfo ?i . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } optional { graph ?i { ?np pav:authoredBy ?author . } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList ?hasElement ?_author_iri . filter(strstarts(str(?hasElement), str(rdf:_))) bind(?_author_iri as ?author) } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList rdf:_1 ?firstAuthor . } } } group by ?np ?label ?timestamp order by desc(?timestamp) limit 10" assertion.
get-latest-bdj-nanopubs-by-author sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix oa: <http://www.w3.org/ns/oa#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix pav: <http://purl.org/pav/> prefix bibo: <http://purl.org/ontology/bibo/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> select distinct ?np ?label (coalesce(?firstAuthor, min(?author), min(?creator)) as ?mainAuthor) (if(if(count(distinct ?author)>0, count(distinct ?author), count(distinct ?creator)) > 1, " et al.", "") as ?authorEtAl) ?timestamp (substr(str(?timestamp), 0, 11) as ?date) where { graph npa:graph { ?np dct:created ?timestamp . ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np rdfs:label ?label . ?np np:hasAssertion ?a . ?np np:hasPublicationInfo ?i . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } graph ?i { ?np bibo:authorList ?authorList . ?authorList ?hasElement ?_author_iri . filter(strstarts(str(?hasElement), str(rdf:_))) } optional { graph ?i { ?np pav:authoredBy ?author . } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList ?hasElement ?author . filter(strstarts(str(?hasElement), str(rdf:_))) } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList rdf:_1 ?firstAuthor . } } } group by ?np ?label ?timestamp order by desc(?timestamp) limit 10" assertion.
get-accepted-nanopubs-by-author sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix bibo: <http://purl.org/ontology/bibo/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> select ?np ?label ?npType ?timestamp where { optional { <x:> <x:> ?_author_iri } # for grlc to pick up the placeholder values (?npType ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(uri(concat("https://w3id.org/np/l/nanopub-query-1.1/repo/type/", sha256(str(?npType)))) as ?service) service ?service { select distinct ?np ?label ?timestamp where { graph npa:graph { ?np dct:created ?timestamp . ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np rdfs:label ?label . ?np np:hasAssertion ?a . ?np np:hasPublicationInfo ?i . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } graph ?i { ?np bibo:authorList ?authorList . ?authorList ?hasElement ?_author_iri . filter(strstarts(str(?hasElement), str(rdf:_))) } } group by ?np ?label ?timestamp } } order by desc(?timestamp)" assertion.
get-latest-accepted sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix oa: <http://www.w3.org/ns/oa#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix pav: <http://purl.org/pav/> prefix bibo: <http://purl.org/ontology/bibo/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> select ?np ?label ?npType ?mainAuthor ?authorEtAl ?timestamp ?date where { values (?npType ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(uri(concat("https://w3id.org/np/l/nanopub-query-1.1/repo/type/", sha256(str(?npType)))) as ?service) service ?service { select distinct ?np ?label (coalesce(?firstAuthor, min(?author), min(?creator)) as ?mainAuthor) (if(if(count(distinct ?author)>0, count(distinct ?author), count(distinct ?creator)) > 1, " et al.", "") as ?authorEtAl) ?timestamp (substr(str(?timestamp), 0, 11) as ?date) where { graph npa:graph { ?np dct:created ?timestamp . ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np rdfs:label ?label . ?np np:hasAssertion ?a . ?np np:hasPublicationInfo ?i . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } optional { graph ?i { ?np pav:authoredBy ?author . } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList ?hasElement ?author . filter(strstarts(str(?hasElement), str(rdf:_))) } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList rdf:_1 ?firstAuthor . } } } group by ?np ?label ?timestamp } } order by desc(?timestamp) limit 10" assertion.
get-top-authors sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix oa: <http://www.w3.org/ns/oa#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix pav: <http://purl.org/pav/> prefix bibo: <http://purl.org/ontology/bibo/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> select ?author (count(distinct ?np) as ?npcount) where { values (?npType ?journalName ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "RIO Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "Biodiversity Data Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "Data Science" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(uri(concat("https://w3id.org/np/l/nanopub-query-1.1/repo/type/", sha256(str(?npType)))) as ?service) service ?service { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np np:hasPublicationInfo ?i . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } optional { graph ?i { ?np pav:authoredBy ?author . } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList ?hasElement ?author . filter(strstarts(str(?hasElement), str(rdf:_))) } } } filter(bound(?author)) } group by ?author order by desc(?npcount) limit 10" assertion.
get-publisher-version-at-bdj-journal sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix prov: <http://www.w3.org/ns/prov#> select ?publisher_version_np where { values ?pubkeys { "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6" } graph npa:graph { ?publisher_version_np npa:hasValidSignatureForPublicKey ?pubkey . ?publisher_version_np np:hasPublicationInfo ?i . filter not exists { ?publisher_version_np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?publisher_version_np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } graph ?i { ?publisher_version_np prov:wasDerivedFrom ?_np_iri . } }" assertion.
get-publisher-version-at-bdj-journal sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix bibo: <http://purl.org/ontology/bibo/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix prov: <http://www.w3.org/ns/prov#> select ?publisher_version_np ?npType ?journalName where { graph npa:graph { bind(replace(str(?_np_iri), "^.*[^a-zA-Z0-9-_](RA[a-zA-Z0-9-_]{43})$", "$1") as ?ac) ?np npa:artifactCode ?ac . } values (?npType ?journalName ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "RIO Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "Biodiversity Data Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "Data Science" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(?__type_iri as ?t) filter(!bound(?t) || ?t = ?npType) bind(uri(concat("https://query.knowledgepixels.com/repo/type/", sha256(str(?npType)))) as ?service) service ?service { graph npa:graph { ?publisher_version_np npa:hasValidSignatureForPublicKey ?pubkey . ?publisher_version_np np:hasPublicationInfo ?i . filter not exists { ?publisher_version_np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?publisher_version_np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } graph ?i { ?publisher_version_np prov:wasDerivedFrom ?np . } } }" assertion.
get-publisher-version-at-bdj-journal sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix bibo: <http://purl.org/ontology/bibo/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix prov: <http://www.w3.org/ns/prov#> select ?publisher_version_np ?npType ?journalName where { graph npa:graph { bind(replace(str(?_np_iri), "^.*[^a-zA-Z0-9-_](RA[a-zA-Z0-9-_]{43})$", "$1") as ?ac) ?np npa:artifactCode ?ac . } values (?npType ?journalName ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "RIO Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "Biodiversity Data Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "Data Science" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(?__type_iri as ?t) filter(!bound(?t) || ?t = ?npType) bind(uri(concat("https://query.knowledgepixels.com/repo/type/", sha256(str(?npType)))) as ?service) service ?service { graph npa:graph { ?publisher_version_np npa:hasValidSignatureForPublicKey ?pubkey . ?publisher_version_np np:hasPublicationInfo ?i . filter not exists { ?publisher_version_np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?publisher_version_np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } graph ?i { ?publisher_version_np prov:wasDerivedFrom ?np . } } }" assertion.
get-publisher-version sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix bibo: <http://purl.org/ontology/bibo/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix prov: <http://www.w3.org/ns/prov#> select ?publisher_version_np ?npType ?journalName where { graph npa:graph { bind(replace(str(?_np_iri), "^.*[^a-zA-Z0-9-_](RA[a-zA-Z0-9-_]{43})$", "$1") as ?ac) ?np npa:artifactCode ?ac . } values (?npType ?journalName ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "RIO Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "Biodiversity Data Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "Data Science" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(?__type_iri as ?t) filter(!bound(?t) || ?t = ?npType) bind(uri(concat("https://query.knowledgepixels.com/repo/type/", sha256(str(?npType)))) as ?service) service ?service { graph npa:graph { ?publisher_version_np npa:hasValidSignatureForPublicKey ?pubkey . ?publisher_version_np np:hasPublicationInfo ?i . filter not exists { ?publisher_version_np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?publisher_version_np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } graph ?i { ?publisher_version_np prov:wasDerivedFrom ?np . } } }" assertion.
get-publisher-version sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix bibo: <http://purl.org/ontology/bibo/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix prov: <http://www.w3.org/ns/prov#> select ?publisher_version_np ?npType ?journalName where { graph npa:graph { bind(replace(str(?_np_iri), "^.*[^a-zA-Z0-9-_](RA[a-zA-Z0-9-_]{43})$", "$1") as ?ac) ?np npa:artifactCode ?ac . } values (?npType ?journalName ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "RIO Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "Biodiversity Data Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "Data Science" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(?__type_iri as ?t) filter(!bound(?t) || ?t = ?npType) bind(uri(concat("https://w3id.org/np/l/nanopub-query-1.1/repo/type/", sha256(str(?npType)))) as ?service) service ?service { graph npa:graph { ?publisher_version_np npa:hasValidSignatureForPublicKey ?pubkey . ?publisher_version_np np:hasPublicationInfo ?i . filter not exists { ?publisher_version_np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?publisher_version_np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } graph ?i { ?publisher_version_np prov:wasDerivedFrom ?np . } } }" assertion.
get-head-np-info sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix bibo: <http://purl.org/ontology/bibo/> prefix pav: <http://purl.org/pav/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix prov: <http://www.w3.org/ns/prov#> select ?head_version_np ?author_version_np ?publisher_version_np ?npType ?journalName ?creator ?mainAuthor ?authorCount ?introducedThing ?label ?date { { select ?head_version_np ?author_version_np ?publisher_version_np ?npType ?journalName where { graph npa:graph { bind(replace(str(?_np_iri), "^.*[^a-zA-Z0-9-_](RA[a-zA-Z0-9-_]{43})$", "$1") as ?ac) ?author_version_np npa:artifactCode ?ac . } optional { values (?npType ?journalName ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "RIO Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "Biodiversity Data Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "Data Science" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(uri(concat("https://w3id.org/np/l/nanopub-query-1.1/repo/type/", sha256(str(?npType)))) as ?service) service ?service { graph npa:graph { ?publisher_version_np npa:hasValidSignatureForPublicKey ?pubkey . ?publisher_version_np np:hasPublicationInfo ?i . filter not exists { ?publisher_version_np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?publisher_version_np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } graph ?i { ?publisher_version_np prov:wasDerivedFrom ?author_version_np . } } } } } bind(coalesce(?publisher_version_np, ?author_version_np) as ?head_version_np) bind(?head_version_np as ?np) { select distinct ?np (coalesce(?signer, min(?declaredCreator)) as ?creator) (coalesce(?firstAuthor, min(?author), min(?creator)) as ?mainAuthor) (if(count(distinct ?author)>0,count(distinct ?author),count(distinct ?creator)) as ?authorCount) ?introducedThing ?label ?date where { graph npa:graph { ?np dct:created ?date . ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np rdfs:label ?label . ?np np:hasPublicationInfo ?i . ?np dct:creator ?declaredCreator . optional { ?np npx:signedBy ?signer . } optional { ?np npx:introduces ?introducedThing . } } optional { graph ?i { ?np pav:authoredBy ?author . } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList ?hasElement ?author . filter(strstarts(str(?hasElement), str(rdf:_))) } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList rdf:_1 ?firstAuthor . } } } group by ?np ?signer ?introducedThing ?label ?date ?firstAuthor } }" assertion.
get-head-np-info sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix bibo: <http://purl.org/ontology/bibo/> prefix pav: <http://purl.org/pav/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix prov: <http://www.w3.org/ns/prov#> select ?head_version_np ?author_version_np ?publisher_version_np ?np_type ?journal_name ?creator ?main_creator_or_author ?main_author ?author_count ?label ?date ?author_version_date { { select ?head_version_np ?author_version_np ?publisher_version_np ?np_type ?journal_name ?author_version_date where { graph npa:graph { bind(replace(str(?_np_iri), "^.*[^a-zA-Z0-9-_](RA[a-zA-Z0-9-_]{43})$", "$1") as ?ac) ?author_version_np npa:artifactCode ?ac . ?author_version_np dct:created ?author_version_date . } optional { values (?np_type ?journal_name ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "RIO Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "Biodiversity Data Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "Data Science" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(uri(concat("https://w3id.org/np/l/nanopub-query-1.1/repo/type/", sha256(str(?np_type)))) as ?service) service ?service { graph npa:graph { ?publisher_version_np npa:hasValidSignatureForPublicKey ?pubkey . ?publisher_version_np np:hasPublicationInfo ?i . filter not exists { ?publisher_version_np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?publisher_version_np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } graph ?i { ?publisher_version_np prov:wasDerivedFrom ?author_version_np . } } } } } bind(coalesce(?publisher_version_np, ?author_version_np) as ?head_version_np) bind(?head_version_np as ?np) { select distinct ?np (coalesce(?signer, min(?declaredCreator)) as ?creator) (coalesce(?firstAuthor, min(?author), min(?creator)) as ?main_author) (if(count(distinct ?author)>0,count(distinct ?author),count(distinct ?creator)) as ?author_count) ?label ?date where { graph npa:graph { ?np dct:created ?date . ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np rdfs:label ?label . ?np np:hasPublicationInfo ?i . ?np dct:creator ?declaredCreator . optional { ?np npx:signedBy ?signer . } } optional { graph ?i { ?np pav:authoredBy ?author . } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList ?hasElement ?author . filter(strstarts(str(?hasElement), str(rdf:_))) } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList rdf:_1 ?firstAuthor . } } } group by ?np ?signer ?introducedThing ?label ?date ?firstAuthor } }" assertion.
get-head-np-info sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix bibo: <http://purl.org/ontology/bibo/> prefix pav: <http://purl.org/pav/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix prov: <http://www.w3.org/ns/prov#> select ?head_version_np ?author_version_np ?publisher_version_np ?np_type ?journal_name ?main_author_or_creator ?creator ?main_author ?author_count ?label ?date ?author_version_date { { select ?head_version_np ?author_version_np ?publisher_version_np ?np_type ?journal_name ?author_version_date where { graph npa:graph { bind(replace(str(?_np_iri), "^.*[^a-zA-Z0-9-_](RA[a-zA-Z0-9-_]{43})$", "$1") as ?ac) ?author_version_np npa:artifactCode ?ac . ?author_version_np dct:created ?author_version_date . } optional { values (?np_type ?journal_name ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "RIO Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "Biodiversity Data Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "Data Science" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(uri(concat("https://w3id.org/np/l/nanopub-query-1.1/repo/type/", sha256(str(?np_type)))) as ?service) service ?service { graph npa:graph { ?publisher_version_np npa:hasValidSignatureForPublicKey ?pubkey . ?publisher_version_np np:hasPublicationInfo ?i . filter not exists { ?publisher_version_np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?publisher_version_np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } graph ?i { ?publisher_version_np prov:wasDerivedFrom ?author_version_np . } } } } } bind(coalesce(?publisher_version_np, ?author_version_np) as ?head_version_np) bind(?head_version_np as ?np) { select distinct ?np (coalesce(?signer, min(?declaredCreator)) as ?creator) (coalesce(?firstAuthor, min(?author), min(?creator)) as ?main_author) (if(count(distinct ?author)>0,count(distinct ?author),count(distinct ?creator)) as ?author_count) ?label ?date where { graph npa:graph { ?np dct:created ?date . ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np rdfs:label ?label . ?np np:hasPublicationInfo ?i . ?np dct:creator ?declaredCreator . optional { ?np npx:signedBy ?signer . } } optional { graph ?i { ?np pav:authoredBy ?author . } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList ?hasElement ?author . filter(strstarts(str(?hasElement), str(rdf:_))) } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList rdf:_1 ?firstAuthor . } } } group by ?np ?signer ?introducedThing ?label ?date ?firstAuthor } bind(coalesce(?main_author, ?creator) as ?main_author_or_creator) }" assertion.
get-head-np-info sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix bibo: <http://purl.org/ontology/bibo/> prefix pav: <http://purl.org/pav/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix prov: <http://www.w3.org/ns/prov#> select ?head_version_np ?author_version_np ?publisher_version_np ?np_type ?journal_name ?main_author_or_creator ?creator ?main_author ?author_count ?label ?date ?author_version_date { { select ?given_np ?head_version_np ?author_version_np_pre ?publisher_version_np ?np_type ?journal_name ?author_version_date where { graph npa:graph { bind(replace(str(?_np_iri), "^.*[^a-zA-Z0-9-_](RA[a-zA-Z0-9-_]{43})$", "$1") as ?ac) ?given_np npa:artifactCode ?ac . } optional { values (?np_type ?journal_name ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "RIO Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "Biodiversity Data Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "Data Science" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(uri(concat("https://w3id.org/np/l/nanopub-query-1.1/repo/type/", sha256(str(?np_type)))) as ?service) service ?service { graph npa:graph { ?publisher_version_np npa:hasValidSignatureForPublicKey ?pubkey . ?publisher_version_np np:hasPublicationInfo ?i . filter not exists { ?publisher_version_np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?publisher_version_np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } { graph ?i { ?publisher_version_np prov:wasDerivedFrom ?given_np . bind(?given_np as ?author_version_np_pre) } } union { graph ?i { filter(?publisher_version_np = ?given_np) ?publisher_version_np prov:wasDerivedFrom ?author_version_np_pre . } } } } } } bind(coalesce(?author_version_np_pre, ?given_np) as ?author_version_np) graph npa:graph { ?author_version_np dct:created ?author_version_date . } bind(coalesce(?publisher_version_np, ?author_version_np) as ?head_version_np) bind(?head_version_np as ?np) { select distinct ?np (coalesce(?signer, min(?declaredCreator)) as ?creator) (coalesce(?firstAuthor, min(?author), min(?creator)) as ?main_author) (if(count(distinct ?author)>0,count(distinct ?author),count(distinct ?creator)) as ?author_count) ?label ?date where { graph npa:graph { ?np dct:created ?date . ?np rdfs:label ?label . ?np np:hasPublicationInfo ?i . ?np dct:creator ?declaredCreator . optional { ?np npx:signedBy ?signer . } } optional { graph ?i { ?np pav:authoredBy ?author . } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList ?hasElement ?author . filter(strstarts(str(?hasElement), str(rdf:_))) } } optional { graph ?i { ?np bibo:authorList ?authorList . ?authorList rdf:_1 ?firstAuthor . } } } group by ?np ?signer ?introducedThing ?label ?date ?firstAuthor } bind(coalesce(?main_author, ?creator) as ?main_author_or_creator) }" assertion.
get-biodiv-nanopubs sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix biolink: <https://w3id.org/biolink/vocab/> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix biodiv: <https://w3id.org/kpxl/biodiv/terms/> prefix prov: <http://www.w3.org/ns/prov#> select distinct ?np ?label (group_concat(distinct ?creator; separator = ", ") as ?creators) ?pubkey ?date ?provtlabel ?provsrc where { graph npa:graph { ?np np:hasPublicationInfo ?i. ?np np:hasProvenance ?p. ?np np:hasAssertion ?a. ?np dct:created ?date . ?np rdfs:label ?labelx . bind(str(?labelx) as ?label) ?np dct:creator ?__creator_iri . bind(?__creator_iri as ?creator) ?np npx:hasNanopubType biodiv:BiodivNanopub . ?np npa:hasValidSignatureForPublicKey ?pubkey . optional { ?np npx:hasNanopubType ?__type_iri . bind(?__type_iri as ?type) } filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } graph ?i { ?np nt:wasCreatedFromProvenanceTemplate ?provtnp . } optional { graph ?p { ?a prov:wasDerivedFrom ?provsrc . } } optional { graph npa:graph { ?provtnp rdfs:label ?provtlabelx . bind(str(?provtlabelx) as ?provtlabel) } } } group by ?np ?label ?type ?pubkey ?date ?provtlabel ?provsrc order by desc(?date)" assertion.
get-biodiv-nanopubs sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix biolink: <https://w3id.org/biolink/vocab/> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix biodiv: <https://w3id.org/kpxl/biodiv/terms/> prefix prov: <http://www.w3.org/ns/prov#> select distinct ?np ?label (group_concat(distinct ?creator; separator = ", ") as ?creators) ?pubkey ?date ?provtlabel ?provsrc where { graph npa:graph { ?np np:hasPublicationInfo ?i. ?np np:hasProvenance ?p. ?np np:hasAssertion ?a. ?np dct:created ?date . ?np rdfs:label ?labelx . bind(str(?labelx) as ?label) ?np dct:creator ?__creator_iri . bind(?__creator_iri as ?creator) ?np npx:hasNanopubType biodiv:BiodivNanopub . ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np npx:hasNanopubType ?__type_iri . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } graph ?i { ?np nt:wasCreatedFromProvenanceTemplate ?provtnp . } optional { graph ?p { ?a prov:wasDerivedFrom ?provsrc . } } optional { graph npa:graph { ?provtnp rdfs:label ?provtlabelx . bind(str(?provtlabelx) as ?provtlabel) } } } group by ?np ?label ?type ?pubkey ?date ?provtlabel ?provsrc order by desc(?date)" assertion.
get-nanopubs-for-paper sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix oa: <http://www.w3.org/ns/oa#> select distinct ?np ?user ?type ?subj ?subjLabel ?rel ?relLabel ?text ?selection ?date where { graph npa:graph { ?np np:hasAssertion ?a . ?np np:hasPublicationInfo ?i. ?np dct:created ?date . ?np dct:creator ?user . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } graph ?a { ?subj ?rel <https://doi.org/10.3897/rio.9.e95174> . } optional { ?a rdfs:comment ?textPre . bind(str(?textPre) as ?text) } optional { graph <http://purl.org/np/RA6d0qLmlRdXd-ubre83LxP22auJdJjXGzaW3W3qH4Neo#assertion> { ?rel rdfs:label ?relLabelPre . bind("cito" as ?typePre) } } optional { graph ?a { ?annotation oa:hasTarget ?annotationtarget ; oa:hasBody ?annotationbody . ?annotationbody rdf:value ?annotationtext . ?annotationtarget oa:hasSource <https://doi.org/10.3897/rio.9.e95174> ; oa:hasSelector ?annotationSelector . optional { ?annotationSelector oa:prefix ?annotatedprefix . } ?annotationSelector oa:exact ?annotatedtext . optional { ?annotationSelector oa:suffix ?annotatedsuffix . } bind("oa" as ?typePre) bind(str(?annotationtext) as ?text) bind(concat(?annotatedprefix, "<h>", ?annotatedtext, "</h>", ?annotatedsuffix) as ?selection) } } bind(replace(str(?subj), '^.*?([a-zA-Z0-9\\-\\_]+)$', '$1') as ?subjLabel). bind(coalesce(str(?relLabelPre), replace(str(?rel), '^.*?([a-zA-Z0-9\\-\\_]+)$', '$1')) as ?relLabel). bind(coalesce(?typePre, "other") as ?type). } order by desc(?date)" assertion.
get-nanopubs-for-paper sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix oa: <http://www.w3.org/ns/oa#> select distinct ?np ?user ?type ?subj ?subjLabel ?rel ?relLabel ?text ?selection ?date where { graph npa:graph { ?np np:hasAssertion ?a . ?np np:hasPublicationInfo ?i. ?np dct:created ?date . ?np dct:creator ?user . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } graph ?a { ?subj ?rel ?_paper_iri . } optional { ?a rdfs:comment ?textPre . bind(str(?textPre) as ?text) } optional { graph <http://purl.org/np/RA6d0qLmlRdXd-ubre83LxP22auJdJjXGzaW3W3qH4Neo#assertion> { ?rel rdfs:label ?relLabelPre . bind("cito" as ?typePre) } } optional { graph ?a { ?annotation oa:hasTarget ?annotationtarget ; oa:hasBody ?annotationbody . ?annotationbody rdf:value ?annotationtext . ?annotationtarget oa:hasSource ?_paper_iri ; oa:hasSelector ?annotationSelector . optional { ?annotationSelector oa:prefix ?annotatedprefix . } ?annotationSelector oa:exact ?annotatedtext . optional { ?annotationSelector oa:suffix ?annotatedsuffix . } bind("oa" as ?typePre) bind(str(?annotationtext) as ?text) bind(concat(?annotatedprefix, "<h>", ?annotatedtext, "</h>", ?annotatedsuffix) as ?selection) } } bind(replace(str(?subj), '^.*?([a-zA-Z0-9\\-\\_]+)$', '$1') as ?subjLabel). bind(coalesce(str(?relLabelPre), replace(str(?rel), '^.*?([a-zA-Z0-9\\-\\_]+)$', '$1')) as ?relLabel). bind(coalesce(?typePre, "other") as ?type). } order by desc(?date)" assertion.
get-nanopubs-for-paper sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix oa: <http://www.w3.org/ns/oa#> select distinct ?np ?user ?type ?subj ?subjLabel ?rel ?relLabel ?text ?selection ?date where { graph npa:graph { ?np np:hasAssertion ?a . ?np np:hasPublicationInfo ?i. ?np dct:created ?date . ?np dct:creator ?user . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } graph ?a { ?subj ?rel ?_paper_iri . } optional { ?a rdfs:comment ?textPre . bind(str(?textPre) as ?text) } optional { graph <http://purl.org/np/RA6d0qLmlRdXd-ubre83LxP22auJdJjXGzaW3W3qH4Neo#assertion> { ?rel rdfs:label ?relLabelPre . bind("cito" as ?typePre) } } optional { graph ?a { ?annotation oa:hasTarget ?annotationtarget ; oa:hasBody ?annotationbody . ?annotationbody rdf:value ?annotationtext . ?annotationtarget oa:hasSource ?_paper_iri ; oa:hasSelector ?annotationSelector . optional { ?annotationSelector oa:prefix ?annotatedprefix . } ?annotationSelector oa:exact ?annotatedtext . optional { ?annotationSelector oa:suffix ?annotatedsuffix . } bind("oa" as ?typePre) bind(str(?annotationtext) as ?text) bind(concat(?annotatedprefix, "<h>", ?annotatedtext, "</h>", ?annotatedsuffix) as ?selection) } } bind(replace(str(?subj), '^.*?([a-zA-Z0-9\\-\\_]+)$', '$1') as ?subjLabel). bind(coalesce(str(?relLabelPre), replace(str(?rel), '^.*?([a-zA-Z0-9\\-\\_]+)$', '$1')) as ?relLabel). bind(coalesce(?typePre, "other") as ?type). } order by desc(?date)" assertion.
get-reactions sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix oa: <http://www.w3.org/ns/oa#> select distinct ?np ?user ?rel ?reltext ?pub ?text ?date ?pubkey where { graph npa:networkGraph { <https://doi.org/10.3897/rio.9.e95174> npx:supersedes* ?pub . } graph npa:graph { ?np np:hasAssertion ?a . ?np dct:created ?date . ?np dct:creator ?user . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } graph ?a { ?a dct:creator ?user . ?a ?rel ?pub . optional { ?a rdfs:comment ?text . } filter regex(str(?rel), "http://purl.org/spar/cito/.*") } graph <http://purl.org/np/RA6d0qLmlRdXd-ubre83LxP22auJdJjXGzaW3W3qH4Neo#assertion> { ?rel rdfs:label ?reltext . } } order by desc(?date)" assertion.
get-reactions sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix oa: <http://www.w3.org/ns/oa#> select distinct ?np ?user ?rel ?reltext ?pub ?text ?date ?pubkey where { graph npa:networkGraph { ?_pub_iri npx:supersedes* ?pub . } graph npa:graph { ?np np:hasAssertion ?a . ?np dct:created ?date . ?np dct:creator ?user . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } graph ?a { ?a dct:creator ?user . ?a ?rel ?pub . optional { ?a rdfs:comment ?text . } filter regex(str(?rel), "http://purl.org/spar/cito/.*") } graph <http://purl.org/np/RA6d0qLmlRdXd-ubre83LxP22auJdJjXGzaW3W3qH4Neo#assertion> { ?rel rdfs:label ?reltext . } } order by desc(?date)" assertion.
get-publisher-version sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix bibo: <http://purl.org/ontology/bibo/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix prov: <http://www.w3.org/ns/prov#> select ?publisher_version_np ?npType ?journalName where { graph npa:graph { bind(replace(str(?_npid), "^.*[^a-zA-Z0-9-_](RA[a-zA-Z0-9-_]{43})$", "$1") as ?ac) ?np npa:artifactCode ?ac . } values (?npType ?journalName ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "RIO Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "Biodiversity Data Journal" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "Data Science" "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(?__type_iri as ?t) filter(!bound(?t) || ?t = ?npType) bind(uri(concat("https://w3id.org/np/l/nanopub-query-1.1/repo/type/", sha256(str(?npType)))) as ?service) service ?service { graph npa:graph { ?publisher_version_np npa:hasValidSignatureForPublicKey ?pubkey . ?publisher_version_np np:hasPublicationInfo ?i . filter not exists { ?publisher_version_np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?publisher_version_np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } graph ?i { ?publisher_version_np prov:wasDerivedFrom ?np . } } }" assertion.
get-accepted-nanopubs-by-author sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix bibo: <http://purl.org/ontology/bibo/> prefix pav: <http://purl.org/pav/> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> select ?np ?label ?npType ?timestamp where { values (?npType ?pubkeys) { (<https://w3id.org/kpxl/pensoft/rio/terms/RIOJournalNanopub> "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/pensoft/bdj/terms/BiodiversityDataJournalNanopub> "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") (<https://w3id.org/kpxl/ios/ds/terms/DataScienceNanopub> "1162349fdeaf431e71ab55898cb2a425b971d466150c2aa5b3c1beb498045a37 cfe248c38933693b1ddeb62e17976a4d2396b0c738af5356bfffbe559d1a3de0 170211c91a70e67992d52c760de3f0052c8c7271bd3c225ef0347245e8517ff6") } bind(uri(concat("https://w3id.org/np/l/nanopub-query-1.1/repo/type/", sha256(str(?npType)))) as ?service) service ?service { select distinct ?np ?label ?timestamp where { graph npa:graph { ?np dct:created ?timestamp . ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np rdfs:label ?label . ?np np:hasAssertion ?a . ?np np:hasPublicationInfo ?i . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter(contains(?pubkeys, sha256(?pubkey))) } { { graph ?i { ?np pav:authoredBy ?_author_iri . } } union { graph ?i { ?np bibo:authorList ?authorList . ?authorList ?hasElement ?_author_iri . filter(strstarts(str(?hasElement), str(rdf:_))) } } } } group by ?np ?label ?timestamp } } order by desc(?timestamp)" assertion.
lookup-fdo-types sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> select ?thing ?label where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np npx:introduces ?thing . ?np np:hasAssertion ?a . } graph ?a { ?thing rdfs:label ?label . filter(contains(lcase(str(?label)), lcase(?_query))) } } limit 10" assertion.
get-all-nanopubs-last30d sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> select distinct ?np ?label ?userid ?date where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np dct:created ?date . optional { ?np rdfs:label ?label . } filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } filter not exists { ?np npx:hasNanopubType npx:retracts . } optional { ?np dct:creator ?userid . } } } order by desc(?date)" assertion.
get-most-used-templates-last30d sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix dct: <http://purl.org/dc/terms/> select ?latest_template_np ?label (sum(?npcount) as ?overallcount) { { select ?template_np (count(distinct ?np) as ?npcount) where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np np:hasPublicationInfo ?i . } graph ?i { ?np nt:wasCreatedFromTemplate ?template_np . } } group by ?template_np } bind(uri(concat("https://w3id.org/np/l/nanopub-query-1.1/repo/type/", sha256(str(nt:AssertionTemplate)))) as ?atservice) { service ?atservice { graph npa:networkGraph { ?latest_template_np npx:supersedes* ?template_np . } graph npa:graph { ?template_np npa:hasValidSignatureForPublicKey ?pubkey . ?latest_template_np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?latest_template_npx npx:invalidates ?latest_template_np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?template_np np:hasAssertion ?a . } graph ?a { ?a rdfs:label ?label . } } } } group by ?latest_template_np ?label order by desc(?overallcount) limit 10" assertion.
get-fdos sparql "prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix fdof: <https://w3id.org/fdof/ontology#> select ?fdo ?label ?type ?np ?creator where { graph npa:graph { ?np npx:hasNanopubType fdof:FAIRDigitalObject . ?np dct:creator ?creator . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np np:hasAssertion ?a . } graph ?a { ?fdo fdof:hasInformationObjectType ?__type_iri . bind(?__type_iri as ?type) ?fdo rdfs:label ?label . bind(?__query as ?query) filter(if(bound(?query), contains(lcase(str(?label)), lcase(?query)), true)) } }" assertion.
get-fdos sparql "prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix fdof: <https://w3id.org/fdof/ontology#> select ?fdo ?label ?type ?np ?creator where { graph npa:graph { ?np npx:hasNanopubType fdof:FAIRDigitalObject . ?np dct:creator ?creator . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np np:hasAssertion ?a . } graph ?a { ?fdo fdof:hasInformationObjectType ?__type_iri . bind(?__type_iri as ?type) ?fdo rdfs:label ?label . bind(?__query as ?query) filter(if(bound(?query), contains(lcase(str(?label)), lcase(?query)), true)) } }" assertion.
find-things sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix dct: <http://purl.org/dc/terms/> prefix search: <http://www.openrdf.org/contrib/lucenesail#> select ?thing ?label ?description ?np ?pubkey ?date where { graph npa:graph { ?np npx:hasNanopubType ?__type_iri . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np dct:created ?date . ?np npx:introduces|npx:describes ?thing . ?np rdfs:label ?label . optional { ?np dct:description ?description . } ?np np:hasAssertion ?a . } ?np search:matches [ search:query ?_query ; search:property rdfs:label ; search:score ?score ; search:snippet ?snippet ] . } limit 10" assertion.
find-things sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix dct: <http://purl.org/dc/terms/> prefix search: <http://www.openrdf.org/contrib/lucenesail#> select distinct ?thing ?label ?description ?np ?pubkey ?date where { graph npa:graph { ?np npx:hasNanopubType ?__type_iri . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np dct:created ?date . ?np npx:introduces|npx:describes ?thing . ?np rdfs:label ?label . optional { ?np dct:description ?description . } ?np np:hasAssertion ?a . } ?np search:matches [ search:query ?_query ; search:property rdfs:label ; search:score ?score ; search:snippet ?snippet ] . } limit 10" assertion.
find-things sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix dct: <http://purl.org/dc/terms/> prefix search: <http://www.openrdf.org/contrib/lucenesail#> select distinct ?thing ?label ?description ?np ?pubkey ?date where { graph npa:graph { ?np npx:hasNanopubType <https://w3id.org/fair/3pff/3PFF-event> . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np dct:created ?date . ?np npx:introduces|npx:describes ?thing . ?np rdfs:label ?label . optional { ?np dct:description ?description . } ?np np:hasAssertion ?a . } ?np search:matches [ search:query ?_query ; search:property rdfs:label ; search:score ?score ; search:snippet ?snippet ] . filter not exists { service <https://w3id.org/np/l/nanopub-query-1.1/repo/type/39692876d0a7881c82e9a2cb6dc8859fb16fa69fb41cea2ace2f8fa70bc52aed> { # (http://purl.org/nanopub/x/disapprovesOf) graph npa:graph { ?disapproval_np np:hasAssertion ?da ; npa:hasValidSignatureForPublicKey ?dpubkey . filter not exists { ?disapproval_npx npx:invalidates ?disapproval_np ; npa:hasValidSignatureForPublicKey ?dpubkey . } } graph <https://w3id.org/np/RA5PyVZnfPpd5ozkVjzQQbWyfLXCmeApLfhsyl8Rgnmh8#assertion> { ?qpubkeys npx:hasPublicKey ?dpubkey . } graph ?da { ?disapprover npx:disapprovesOf ?np . } } } } limit 10" assertion.
find-3pff-events sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix dct: <http://purl.org/dc/terms/> prefix search: <http://www.openrdf.org/contrib/lucenesail#> select distinct ?thing ?label ?description ?np ?pubkey ?date where { graph npa:graph { ?np npx:hasNanopubType <https://w3id.org/fair/3pff/3PFF-event> . ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np dct:created ?date . ?np npx:introduces|npx:describes ?thing . ?np rdfs:label ?label . optional { ?np dct:description ?description . } ?np np:hasAssertion ?a . } ?np search:matches [ search:query ?_query ; search:property rdfs:label ; search:score ?score ; search:snippet ?snippet ] . filter not exists { service <https://w3id.org/np/l/nanopub-query-1.1/repo/type/39692876d0a7881c82e9a2cb6dc8859fb16fa69fb41cea2ace2f8fa70bc52aed> { # (http://purl.org/nanopub/x/disapprovesOf) graph npa:graph { ?disapproval_np np:hasAssertion ?da ; npa:hasValidSignatureForPublicKey ?dpubkey . filter not exists { ?disapproval_npx npx:invalidates ?disapproval_np ; npa:hasValidSignatureForPublicKey ?dpubkey . } } graph <https://w3id.org/np/RA5PyVZnfPpd5ozkVjzQQbWyfLXCmeApLfhsyl8Rgnmh8#assertion> { ?qpubkeys npx:hasPublicKey ?dpubkey . } graph ?da { ?disapprover npx:disapprovesOf ?np . } } } } limit 10" assertion.
get-instance-count sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> select (count(?instance) as ?count) where { graph ?g { ?instance a ?_class_iri . } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np npa:hasGraph ?g . } }" assertion.
get-latest-instance-nps sparql "prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> select ?instance ?np ?label ?date ?pubkey where { graph ?g { ?instance a ?_class_iri . } graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np npa:hasGraph ?g . ?np dct:created ?date . optional { ?np rdfs:label ?label } } } order by desc(?date) limit 10" assertion.
get-3pff-events sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix prov: <http://www.w3.org/ns/prov#> prefix tpff: <https://w3id.org/fair/3pff/> select (?event as ?Event_ID) (?eventShortName as ?Event_ID__label) (?eventLongName as ?Event_Name) (?eventDate as ?Date) (group_concat(?eventOrganizer; separator=" ") as ?Organizers) (group_concat(?eventFacilitator; separator=" ") as ?Facilitators) (group_concat(?eventMoreInfoLink; separator=" ") as ?More_Info) (?np as ?Source) where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np dct:created ?npDate . ?np dct:creator ?npCreator . ?np np:hasAssertion ?assertion . ?np npx:introduces ?event . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } graph ?assertion { ?event a tpff:3PFF-event . ?event rdfs:label ?eventName . bind(replace(str(?eventName), ' ?\\|.*$', '') as ?eventShortName) bind(replace(str(?eventName), '^([A-Z0-9]{2,3}).*$', '$1') as ?eventSeries) bind(replace(str(?eventName), '^.*\\| ?(.*)$', '$1') as ?eventLongName) ?event dct:date ?eventDate . optional { ?event tpff:has-event-organizer ?eventOrganizer . } optional { ?event tpff:has-event-facilitator ?eventFacilitator . } #optional { # values ?eventType { tpff:In-Person-Event tpff:Hybrid-Event tpff:Virtual-Event } # ?event a ?eventType . # bind(replace(str(?eventType), '^.*/', '') as ?eventTypeName) #} optional { ?event rdfs:seeAlso ?eventMoreInfoLink . } } } group by ?event ?eventShortName ?eventLongName ?eventDate ?np order by desc(?eventDate)" assertion.
get-3pff-events sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix prov: <http://www.w3.org/ns/prov#> prefix tpff: <https://w3id.org/fair/3pff/> select (?event as ?Event_ID) (?eventShortName as ?Event_ID__label) (?eventLongName as ?Event_Name) (?eventDate as ?Date) (group_concat(distinct ?eventOrganizer; separator=" ") as ?Organizers) (group_concat(distinct ?eventFacilitator; separator=" ") as ?Facilitators) (group_concat(distinct ?eventMoreInfoLink; separator=" ") as ?More_Info) (?np as ?Source) where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np dct:created ?npDate . ?np dct:creator ?npCreator . ?np np:hasAssertion ?assertion . ?np npx:introduces ?event . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } } graph ?assertion { ?event a tpff:3PFF-event . ?event rdfs:label ?eventName . bind(replace(str(?eventName), ' ?\\|.*$', '') as ?eventShortName) bind(replace(str(?eventName), '^([A-Z0-9]{2,3}).*$', '$1') as ?eventSeries) bind(replace(str(?eventName), '^.*\\| ?(.*)$', '$1') as ?eventLongName) ?event dct:date ?eventDate . optional { ?event tpff:has-event-organizer ?eventOrganizer . } optional { ?event tpff:has-event-facilitator ?eventFacilitator . } #optional { # values ?eventType { tpff:In-Person-Event tpff:Hybrid-Event tpff:Virtual-Event } # ?event a ?eventType . # bind(replace(str(?eventType), '^.*/', '') as ?eventTypeName) #} optional { ?event rdfs:seeAlso ?eventMoreInfoLink . } } } group by ?event ?eventShortName ?eventLongName ?eventDate ?np order by desc(?eventDate)" assertion.
get-monthly-active-user-count sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix prov: <http://www.w3.org/ns/prov#> prefix foaf: <http://xmlns.com/foaf/0.1/> select ?month (count(distinct ?userid) as ?usercount) where { { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np dct:creator ?userid . ?np dct:created ?date . } } union { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . ?np np:hasAssertion ?assertion . ?np np:hasProvenance ?prov . ?np dct:created ?date . } graph ?prov { ?assertion prov:wasAttributedTo ?userid . } } filter not exists { graph npa:graph { ?np npa:hasSubIri ?userid . } } bind(substr(str(?date), 0, 8) as ?month) } group by ?month order by desc(?month)" assertion.
get-nanopubs-for-pubkey-and-type sparql "prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> select ?np where { graph npa:graph { ?np npa:hasValidSignatureForPublicKeyHash ?_pubkeyhash . ?np npx:hasNanopubType ?__type_iri . } }" assertion.
get-datasets sparql "prefix prov: <http://www.w3.org/ns/prov#> prefix schema: <https://schema.org/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> select distinct ?dataset ?label ?maintainer where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np dct:created ?date . ?np np:hasAssertion ?a . ?np np:hasProvenance ?p . } graph ?a { ?dataset a <http://purl.org/dc/dcmitype/Dataset> . optional { ?dataset dct:title ?label . } optional { ?dataset schema:maintainer ?maintainer . } } graph ?p { ?a prov:wasAttributedTo ?agent . } }" assertion.
get-approved-nanopubs sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> select ?approved_np ?approver ?pubkey ?np ?date where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np npx:hasNanopubType npx:approvesOf . filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } ?np dct:created ?date . ?np dct:creator ?approver . ?np np:hasAssertion ?a . } graph ?a { ?approver npx:approvesOf ?approved_np . filter(regex(str(?approved_np), '^.*[^A-Za-z0-9-_]RA[A-Za-z0-9-_]{43}$')) } }" assertion.
get-datasets sparql "prefix prov: <http://www.w3.org/ns/prov#> prefix schema: <https://schema.org/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> select distinct ?dataset ?label ?repository where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np dct:created ?date . ?np np:hasAssertion ?a . ?np np:hasProvenance ?p . } graph ?a { ?dataset a <http://purl.org/dc/dcmitype/Dataset> . optional { ?dataset dct:title ?label . } optional { ?dataset schema:maintainer ?repository . } } graph ?p { ?a prov:wasAttributedTo ?agent . } }" assertion.
list_nonqualifed_fsr sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> select distinct ?np ?label (group_concat(distinct ?typelabel; separator = ", ") as ?types) ?date where { values ?service { <https://w3id.org/np/l/nanopub-query-1.1/repo//type/3ef5b11551ebc44e34f4bca614b387204447656ce195314532769ca7b20143fe> <https://w3id.org/np/l/nanopub-query-1.1/repo/type/070fa9a0f87a189bc2eb9d4c1a14f68f11538cc2229b9f4fd6ac026a3d2ce570> <https://w3id.org/np/l/nanopub-query-1.1/repo/type/6a09747868afc83837e38d1bac79362fbcc3e2032cff2f2d244f4e24cbd085c6> <https://w3id.org/np/l/nanopub-query-1.1/repo/type/92efd7a0ea4be4e01ec0817ccec87f975203b30addcc3166a204498ffed73b66> <https://w3id.org/np/l/nanopub-query-1.1/repo/type/2d7aa7a2eac5d58b5cf928ab5e5a71ed1bda00845942f26fc31647c42c7c58a3> } service ?service { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } filter not exists { ?np npx:hasNanopubType npx:ExampleNanopub . } ?np dct:created ?date . filter(str(?date) > "2022") ?np np:hasAssertion ?a . } graph ?a { #?thing a <https://w3id.org/fair/fip/terms/FAIR-Supporting-Resource> . ?thing a ?type . ?thing rdfs:label ?labelx . } } filter( ?type != <https://w3id.org/fair/fip/terms/FAIR-Supporting-Resource> ) filter( ?type != <https://w3id.org/fair/fip/terms/Available-FAIR-Supporting-Resource> ) filter( ?type != <https://w3id.org/fair/fip/terms/FAIR-Supporting-Resource-to-be-Developed> ) filter( ?type != <https://w3id.org/fair/fip/terms/FAIR-Enabling-Resource> ) filter( ?type != <https://w3id.org/fair/fip/terms/Available-FAIR-Enabling-Resource> ) filter( ?type != <https://w3id.org/fair/fip/terms/FAIR-Enabling-Resource-to-be-Developed> ) bind(replace(str(?type), '^.*/([^/]+)$', '$1') as ?typelabel) bind(str(?labelx) as ?label) optional { select ?np ?disapproval { service <https://w3id.org/np/l/nanopub-query-1.1/repo/type/39692876d0a7881c82e9a2cb6dc8859fb16fa69fb41cea2ace2f8fa70bc52aed> { graph npa:graph { ?disapproval npa:hasValidSignatureForPublicKey ?dpubkey . ?disapproval np:hasAssertion ?da . filter not exists { ?disapprovalx npx:invalidates ?disapproval ; npa:hasValidSignatureForPublicKey ?dpubkey . } } graph <https://w3id.org/np/RAkVk6aKWsmgcuKtPA7OSp2h-GbDfx8xrz_kJAAgY8Xa4#assertion> { ?dpubkeys npx:hasPublicKey ?dpubkey . } graph ?da { ?dsomebody npx:disapprovesOf ?np . } } } } filter(!bound(?disapproval)) optional { select ?np ?qualification { service <https://w3id.org/np/l/nanopub-query-1.1/repo/type/cd51a3ac3e109fd12aacd5a324e14ebff644ce209c916e4250a3f50c2ddf0051> { graph npa:graph { ?qualification npa:hasValidSignatureForPublicKey ?qpubkey . ?qualification np:hasAssertion ?qa . filter not exists { ?qualificationx npx:invalidates ?qualification ; npa:hasValidSignatureForPublicKey ?qpubkey . } } graph <https://w3id.org/np/RAkVk6aKWsmgcuKtPA7OSp2h-GbDfx8xrz_kJAAgY8Xa4#assertion> { ?qpubkeys npx:hasPublicKey ?qpubkey . } graph ?qa { ?qsomebody npx:qualifies ?np . } } } } filter(!bound(?qualification)) } group by ?np ?label ?date order by desc(?date)" assertion.
get-services sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> select ?np ?service ?date ?pubkey where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } optional { ?np dct:created ?date . } ?np np:hasAssertion ?a . } graph ?a { ?service a npx:NanopubService . } } order by desc(?date)" assertion.
get-services sparql "prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix dct: <http://purl.org/dc/terms/> prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> select ?np ?service ?serviceType ?date ?pubkey where { graph npa:graph { ?np npa:hasValidSignatureForPublicKey ?pubkey . filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } optional { ?np dct:created ?date . } ?np np:hasAssertion ?a . } graph ?a { ?service a npx:NanopubService . ?service a ?serviceType . filter(?serviceType != npx:NanopubService) } } order by desc(?date)" assertion.
get-overunderrated-entries sparql "prefix np: <http://www.nanopub.org/nschema#> prefix npa: <http://purl.org/nanopub/admin/> prefix npx: <http://purl.org/nanopub/x/> prefix xsd: <http://www.w3.org/2001/XMLSchema#> prefix dct: <http://purl.org/dc/terms/> prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> prefix foaf: <http://xmlns.com/foaf/0.1/> prefix nt: <https://w3id.org/np/o/ntemplate/> prefix opo: <https://w3id.org/kpxl/opo/terms/> select distinct ?person ?rel ?thing ?np ?date where { { { graph npa:graph { ?np np:hasAssertion ?a . ?np npx:hasNanopubType opo:thinksIsOverrated . bind(opo:thinksIsOverrated as ?rel) } graph ?a { ?person opo:thinksIsOverrated ?thing . } } union { graph npa:graph { ?np np:hasAssertion ?a . ?np npx:hasNanopubType opo:thinksIsUnderrated . } graph ?a { ?person opo:thinksIsUnderrated ?thing . bind(opo:thinksIsUnderrated as ?rel) } } } graph npa:graph { ?np np:hasPublicationInfo ?i. filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . } ?np dct:created ?date . ?np npa:hasValidSignatureForPublicKey ?pubkey . } graph ?i { ?np dct:creator ?person . } } order by desc(?date)" assertion.