Matches in Nanopublications for { ?s ?p ?o <https://w3id.org/np/RAgewjyjDip-au9b3ZvDRaEnwXZQ_hUVZkFjOzI5mISSA/assertion>. }
- f8050931-c4dc-48d0-85d7-489292466a09 name "network" assertion.
- 1db93f3a-5732-4fb6-ac28-14ff2b55ccbb name "## Contributing [fork]: /fork [pr]: /compare [style]: https://standardjs.com/ [code-of-conduct]: CODE_OF_CONDUCT.md" assertion.
- ed49a599-f8a8-4c12-a05d-3712467babdf name ".gitignore" assertion.
- 9dc174fb-2329-452a-a381-294c5271a6b5 name ".snakemake" assertion.
- 21dfa77e-a9f7-4ad4-badb-f8dcc1bcc931 name "2023-10-19T182635.539173.snakemake.log" assertion.
- a9f6e252-5e53-42a4-8a7f-b4a97b1c40cd name "2023-10-19T182926.274815.snakemake.log" assertion.
- 572775af-ed1f-4c29-8aa5-884686ab257d name "2023-10-19T183224.995853.snakemake.log" assertion.
- c16775dc-e7c3-486c-990c-3be2c5ea7a1a name "2023-10-19T201611.869180.snakemake.log" assertion.
- 7d719c89-cfba-4eca-8341-ac6daa6b370f name "CITATION.cff" assertion.
- 04bdbfbd-b95b-4ec8-9b2b-36bfc698c52b name "CODE_OF_CONDUCT.md" assertion.
- aef89e9f-9d50-4fde-8228-740059cb5c16 name "CONTRIBUTING.md" assertion.
- 9c611509-48ea-4cba-b0ca-594c08da12b8 name "Diseases and conditions" assertion.
- eb7e7a24-4da5-4831-8bd4-0a7275d926d8 name "Diseases and conditions" assertion.
- 06814c66-d6f5-4d56-8024-1c8d2e58a4db name "LICENSE.md" assertion.
- 846568c0-81be-46a9-9556-b3b5e2292abd name "Public relations" assertion.
- bts480 name "Snakemake" assertion.
- Workflow-RO-Crate name "Workflow RO-Crate Profile" assertion.
- 0000-0002-6830-1948 name "Yasmmin Martins" assertion.
- bcb2ed22-6d5f-4729-8bda-6e859f8c37c7 name "__pycache__" assertion.
- 9bc60d27-d928-4a67-b0b0-ae4d8619baa5 name "acquisition step" assertion.
- dc2458ae-e759-4a66-8b66-ec7cba0ae721 name "addestramento" assertion.
- 55ecaa21-84d9-42ec-b9bc-167cf49afa09 name "clean_outputs.sh" assertion.
- 24f02bf4-0975-45cf-9f5a-ec39be7e52c5 name "clean_steps.py" assertion.
- 9456290e-07e1-4286-b1f0-1dd722a7b653 name "config.yaml" assertion.
- c16364f9-cdaf-4f69-8b2d-24ec86e0760a name "config_example.yaml" assertion.
- 71bd00c7-2443-4a7c-b15f-63bab9d9e1aa name "config_laptop.yaml" assertion.
- 07e9fdac-98dc-4a1c-9785-d8d311108cde name "dag.pdf" assertion.
- 25b7e0e8-a10a-440d-b3ec-f99ab8496cbf name "data acquisition step" assertion.
- c0ff9b95-c133-46a2-8b43-7e9adda5a910 name "data_preprocessing.cpython-38.pyc" assertion.
- 51b0f2f4-234c-4654-99b4-17c3860a5d44 name "data_preprocessing_v1.py" assertion.
- a6908148-8ac2-4c03-b15d-261158b451ae name "evaluation visualization step" assertion.
- 8b8059d8-8685-4549-b8ba-45c66abbd09d name "evaluation_visualization.cpython-38.pyc" assertion.
- 87333d63-a279-4521-b93e-ba87ad7af3ba name "evaluation_visualization.py" assertion.
- 6a8ba727-fe18-4cf9-901b-cd475d144ab5 name "folder" assertion.
- 12c2cb86-f0cb-4af4-9573-fe75e143f7e8 name "get_metrics.py" assertion.
- 9d3e75e3-947d-4512-b0a4-5374946bff18 name "home" assertion.
- efe7db16-7b5f-438a-b506-6cab1eebd39e name "home" assertion.
- c407cb7e-f6f9-4f65-a59d-78e055bb4d02 name "host proteins information" assertion.
- 8a640df1-03a0-49a2-9428-3f3618cdd827 name "host-pathogen protein-protein interaction" assertion.
- 87226596-ccc0-45e0-a273-9bf48505f929 name "hp_ppi_augmentation.yml" assertion.
- 79471dea-aa76-4ff0-bc4a-742f94d355f3 name "identifier" assertion.
- bf2c5ac9-fc47-445e-b1ed-b9635968a414 name "identifier" assertion.
- 95a02c36-f332-4553-84a5-b5e8a84fc138 name "input_example" assertion.
- b00941e9-c13e-490a-9c62-8e16686a0643 name "instruction" assertion.
- 7f8cec9d-f890-4575-9d29-2ecab9dca5e8 name "interaction data" assertion.
- 111af928-f686-4bda-924b-4d6407e6feed name "law" assertion.
- ebc55bb6-993d-4f70-b995-17a4664bb0e9 name "list_virulence_factors_full.tsv" assertion.
- 3d05979d-b804-4a3a-805e-d3ec9806ef06 name "log" assertion.
- c2131dd6-62cc-4d44-8083-704edbc6a3ce name "mapping_geneName_uniprot.tsv" assertion.
- a056477a-bbc1-45d0-9ba4-3b8c289a1bb6 name "model_trained.joblib" assertion.
- b0c9b02f-83cb-410f-8028-cfd13491f0d1 name "model_trained.joblib" assertion.
- 609b841e-2660-40ff-a156-609a2769d813 name "npm test" assertion.
- a0ba2136-f117-412d-affb-a594d0f0367a name "organism" assertion.
- f3327c85-d7a6-4af9-b92b-38a8edd6d3c4 name "organism" assertion.
- 0062773b-e965-4d7d-97d5-1ce1bc6c7808 name "organism folders directory" assertion.
- 7776b24b-a086-4195-9f8f-056836c6a0a0 name "params_augmentation.tsv" assertion.
- 15c39d0d-0f43-4d64-8eba-6404356a5adf name "params_example.tsv" assertion.
- 33d9f4f0-0e3f-4797-89a2-2267f00f7297 name "pathogen" assertion.
- a4aaa62c-5ddd-4cbc-970f-7171b805d093 name "pathogen" assertion.
- d2b7168d-9c95-406e-8079-0cc1628375cb name "pathogen network" assertion.
- 2404c310-981b-4ff7-b898-2404e3f6920f name "preparation instruction" assertion.
- 28a2826c-83a2-4912-87d5-5b06809d55e3 name "pull" assertion.
- a76aba8c-99c2-402d-984c-a82439a65f6d name "pull" assertion.
- 53fe5737-1ebd-4df6-ad43-0f2df330fc2a name "pull request 1" assertion.
- 4f089e4d-ac64-47d0-b7b9-c114f675caf3 name "query protein ID" assertion.
- 6f6e8ba4-ce00-45e0-9063-30e54af32626 name "readme.md" assertion.
- b2624fab-49ca-4a8d-aaa5-496ea8a622b2 name "readme.md" assertion.
- 9f594136-23cb-4514-a3b0-7ca5193003cf name "reduced_workflow.png" assertion.
- ee6fb1ee-e7de-42d7-82e0-ed5e33bb3c36 name "reduced_workflow.png" assertion.
- cceecac1-b5ac-4102-bd0a-b351a1f10570 name "request" assertion.
- 24313793-4361-4407-aa07-4df8f0cee2f5 name "reset_input.zip" assertion.
- 7e5af759-e546-4f73-b221-18bdb12c38b0 name "results.zip" assertion.
- 14ffbeea-0136-4cd9-aab2-b972b0af8aa7 name "rete" assertion.
- 1a309c23-b22b-4384-acd2-b47eace15095 name "ro-crate-preview.html" assertion.
- cbd68a6c-d478-4b16-b753-76f0b71f937b name "s_aureus" assertion.
- 074153e1-485d-47c3-8fd1-9b872f4d9bd3 name "s_aureus.tar.xz" assertion.
- 0f7be7e1-67c9-4f86-a4e3-377e9814ac87 name "step" assertion.
- 6f2c1981-b3c6-4b9e-b1fa-7ec9d3f190fe name "step" assertion.
- 593fb093-724b-46da-8db4-5e02795beb81 name "string protein identifier" assertion.
- abc766e7-ba36-456b-87de-2f17ee5ae845 name "taxdump.tar.gz" assertion.
- 6a7dbfa6-fc66-449f-bbe5-2b4d83cbabb3 name "test_Snakefile" assertion.
- 05f8872e-477a-4d77-ac87-2fc8802af478 name "training ppi augmentation" assertion.
- 40665224-948f-4899-ba7e-9583839acf06 name "training_data" assertion.
- b1c57e68-6255-41b8-b621-555a2ae094ae name "training_ppi_augmentation.cpython-38.pyc" assertion.
- 6b5ce189-93d3-4817-8879-57c83efcadea name "training_ppi_augmentation.py" assertion.
- 9d34e7a7-777c-4c91-9d69-e34ca957e5a1 name "update test" assertion.
- 5271272f-075f-4a0e-ae9f-32e3d9ae9811 name "using pull request" assertion.
- 47bcd546-feb2-43bb-891a-77dd851994eb name "visualization step" assertion.
- 46742160-8c62-48ef-a24d-50418dac0a11 name "work in progress pull request" assertion.
- bf79d072-d5db-4eb9-b7fe-602b9bb7243c name "workflow.cwl" assertion.
- 3b6d6431-467c-4cb3-8a07-67a1c561d23c name "workflow.png" assertion.
- 01710589-2ac6-4c4f-8b32-409e6ba1adb7 name "workflow_hpAugmentation" assertion.
- dd5c3d62-b632-46a1-99e4-761f2e6cb60d name "Research Object Crate for HPPIDiscovery - Scientific workflow to augment, predict and evaluate host-pathogen protein-protein interactions" assertion.
- 0920cb66-a159-4d81-aae8-4daa0987114d name "Then it proceeds parsing and cleaning the HPIDB results and downloading the protein interactions of the found organisms from the STRING database." assertion.
- 5bfb5205-048a-404d-b9fc-b1115ce44391 name "Work in Progress pull requests are also welcome to get feedback early on, or if there is something blocked you." assertion.
- 13c69a83-de3f-4379-b137-6a12d45bf6e7 name "HPPIDiscovery - Scientific workflow to augment, predict and evaluate host-pathogen protein-protein interactions" assertion.
- a9edc4b8-9ae2-48e7-80ab-6bd1df7a68e9 name "Research Object Crate for HPPIDiscovery - Scientific workflow to augment, predict and evaluate host-pathogen protein-protein interactions." assertion.
- ceb5652b-ae7b-4c51-9216-d21e3bc3a4fc name "This option is extremely useful when you are not sure that your organism has validated protein interactions, then it finds validated interactions from the closest proteins in the database." assertion.
- 097bd8b0-9a8b-470c-bd27-e2cd8d7a895a name "Scientific workflow to augment, predict and evaluate host-pathogen protein-protein interactions" assertion.
- 1a95b293-a74b-4489-88f1-e9a78678cec7 name "## Resources - [How to Contribute to Open Source](https://opensource.guide/how-to-contribute/) - [Using Pull Requests](https://help.github.com/articles/about-pull-requests/) - [GitHub Help](https://help.github.com)" assertion.
